RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 LPAR4Q99677 370 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 SLC6A7Q99884 636 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 MAPKAP1Q9BPZ7 522 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZNF251Q9BRH9 671 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 DGCR6LQ9BY27 220 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 POLDIP3Q9BY77 421 aaKnown RBP4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 RACGAP1Q9H0H5 632 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 MEGF9Q9H1U4 602 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 OR51V1Q9H2C8 321 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 OR51B5Q9H339 312 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 METTL8Q9H825 291 aaKnown RBP4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 VCX3AQ9NNX9 186 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 A4GALTQ9NPC4 353 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 NECAP2Q9NVZ3 263 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 ABCD2Q9UBJ2 740 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 DKK2Q9UBU2 259 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 STUB1Q9UNE7 303 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 SAMHD1Q9Y3Z3 626 aaKnown RBP4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 ASB4Q9Y574 426 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 NCKAP5O14513 1909 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 SETXQ7Z333 2677 aaKnown RBP4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 CENPEQ02224 2701 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 COL12A1Q99715 3063 aa4.61□□□□□ -1.67
HMGB3P7-201ENST00000400214 PHF3Q92576 2039 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 CACNA1CQ13936 2221 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 NPIPA5A0A0B4J1W7 369 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 IGHV3-20A0A0C4DH32 117 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 A0A0G2JN53 185 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 LOC105371267A0A1B0GV96 52 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 NPIPA5E9PKD4 350 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 H3BN98 237 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 M0QXV9 152 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SAP18O00422 153 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 MANBAO00462 879 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 TFECO14948 347 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 MGRN1O60291 552 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SLC19A2O60779 497 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 EEDO75530 441 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 AADACP22760 399 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 HTR2CP28335 458 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SERPINB5P36952 375 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 PSMD7P51665 324 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 RAP1GDS1P52306 607 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 TMEM50BP56557 158 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 OR4D2P58180 307 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 B3GALT5-AS1P59052 145 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SPATS1Q496A3 300 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SOHLH1Q5JUK2 328 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SAMD4BQ5PRF9 694 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 TCHHL1Q5QJ38 904 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 UTF1Q5T230 341 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 C9orf135Q5VTT2 229 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 IRAK1BP1Q5VVH5 260 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 REEP3Q6NUK4 255 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 LEG1Q6P5S2 330 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZNF621Q6ZSS3 439 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SLC29A4Q7RTT9 530 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 COMMD6Q7Z4G1 85 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 FUNDC1Q8IVP5 155 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 C10orf107Q8IVU9 208 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZNF100Q8IYN0 542 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SPAG16Q8N0X2 631 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 C4orf33Q8N1A6 199 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZADH2Q8N4Q0 377 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 MORN4Q8NDC4 146 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 OR5M9Q8NGP3 310 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 CNIH3Q8TBE1 160 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 TMEM239Q8WW34 195 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 PIK3R3Q92569 461 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ANKRD9Q96BM1 317 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZNF354BQ96LW1 612 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZIM3Q96PE6 472 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 NEDD4LQ96PU5 975 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ADOQ96SZ5 270 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 CSF3RQ99062 836 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 DCTN5Q9BTE1 182 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 URM1Q9BTM9 101 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 BDH2Q9BUT1 245 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ULBP2Q9BZM5 246 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 TRIM4Q9C037 500 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 RPF2Q9H7B2 306 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZNF703Q9H7S9 590 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 TRIM45Q9H8W5 580 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 FOLH1BQ9HBA9 442 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SLC25A19Q9HC21 320 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZBTB20Q9HC78 741 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 SIRT7Q9NRC8 400 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 PRTFDC1Q9NRG1 225 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 VPS29Q9UBQ0 182 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 WARS2Q9UGM6 360 aaKnown RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 KIF25Q9UIL4 384 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 ARHGAP21Q5T5U3 1957 aa4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 NCOA6Q14686 2063 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P7-201ENST00000400214 UTP20O75691 2785 aaKnown RBP4.59□□□□□ -1.67
HMGB3P7-201ENST00000400214 SLCO1B7G3V0H7 640 aa4.59□□□□□ -1.67
HMGB3P7-201ENST00000400214 J3QKU1 62 aa4.59□□□□□ -1.67
HMGB3P7-201ENST00000400214 ZNF195O14628 629 aa4.59□□□□□ -1.67
HMGB3P7-201ENST00000400214 TM9SF1O15321 606 aa4.59□□□□□ -1.67
HMGB3P7-201ENST00000400214 BIRC5O15392 142 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms