RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 NAA40Q86UY6 237 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 SERPINA12Q8IW75 414 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 FTMTQ8N4E7 242 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
VAPB-202ENST00000395802 OR5D14Q8NGL3 314 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 OR13C5Q8NGS8 318 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 PPIL3Q9H2H8 161 aaKnown RBP11.87□□□□□ -0.51
VAPB-202ENST00000395802 TPK1Q9H3S4 243 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 ZNF275Q9NSD4 429 aaPredicted RBP11.87□□□□□ -0.51
VAPB-202ENST00000395802 NDRG3Q9UGV2 375 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 SPEF1Q9Y4P9 236 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 A0A075B6Q4 140 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 TMEM127O75204 238 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 IGLV3-1P01715 115 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 CLEC2LP0C7M8 214 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 SORDQ00796 357 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
VAPB-202ENST00000395802 TAB1Q15750 504 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 PGAP1Q75T13 922 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 PLPP7Q8NBV4 271 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 RGP1Q92546 391 aaPredicted RBP11.86□□□□□ -0.51
VAPB-202ENST00000395802 AP3S1Q92572 193 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 PPP1R14AQ96A00 147 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 REEP6Q96HR9 211 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
VAPB-202ENST00000395802 NOX4Q9NPH5 578 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 FOXJ3Q9UPW0 622 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 CRYAAP02489 173 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 ZNF20P17024 532 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 MAP2K3P46734 347 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 SOX2P48431 317 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 PPP3R1P63098 170 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 IGFBP7Q16270 282 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 SNAI3Q3KNW1 292 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 FAM27D1Q5T7N8 215 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 OR51A4Q8NGJ6 313 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 BCL2L14Q9BZR8 327 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 NEK6Q9HC98 313 aa11.86□□□□□ -0.51
VAPB-202ENST00000395802 TRBV5-7A0A0A0MS05 114 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 FAM90A27PA6NNH2 459 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 AGFG2O95081 481 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 CCL2P13500 99 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 RIPPLY1Q0D2K3 151 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 HNRNPA0Q13151 305 aaKnown RBP11.85□□□□□ -0.51
VAPB-202ENST00000395802 DCTN2Q13561 401 aaKnown RBP11.85□□□□□ -0.51
VAPB-202ENST00000395802 TMEM108Q6UXF1 575 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 Q6ZSR3 168 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 ZNF843Q8N446 348 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 MFSD4AQ8N468 514 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 SEMA6DQ8NFY4 1073 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 PP6455Q8WZ26 134 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 FAM71F1Q96KD3 344 aaPredicted RBP11.85□□□□□ -0.51
VAPB-202ENST00000395802 BBC3Q96PG8 261 aaPredicted RBP11.85□□□□□ -0.51
VAPB-202ENST00000395802 ZNF319Q9P2F9 582 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 PLEKHB1Q9UF11 243 aaPredicted RBP11.85□□□□□ -0.51
VAPB-202ENST00000395802 PCNX1Q96RV3 2341 aa11.85□□□□□ -0.51
VAPB-202ENST00000395802 A0A1B0GTI1 187 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 CLDN25C9JDP6 229 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 ERCC1P07992 297 aaPredicted RBP11.84□□□□□ -0.51
VAPB-202ENST00000395802 CECR9P0C854 216 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 BMP4P12644 408 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 FSTP19883 344 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 PTAFRP25105 342 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 GNALP38405 381 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 DDOSTP39656 456 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 UCP2P55851 309 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 HGFACQ04756 655 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 ZBTB37Q5TC79 503 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 MRPL21Q7Z2W9 205 aaKnown RBP11.84□□□□□ -0.51
VAPB-202ENST00000395802 S100ZQ8WXG8 99 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 C1QTNF6Q9BXI9 259 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 HMG20AQ9NP66 347 aa11.84□□□□□ -0.51
VAPB-202ENST00000395802 IGHV1-18A0A0C4DH31 117 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 A0A1W2PPK0 400 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 SMIM30A4D0T7 59 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 M0R1B8 84 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 OCMP0CE72 109 aaPredicted RBP11.83□□□□□ -0.51
VAPB-202ENST00000395802 ZNF35P13682 527 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 RAB3BP20337 219 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 UQCRFS1P47985 274 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 GLYATL3Q5SZD4 288 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 NR2C2APQ86WQ0 139 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 NKAIN3Q8N8D7 197 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 CSNK2A3Q8NEV1 391 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 OR14K1Q8NGZ2 314 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 OR10AC1Q8NH08 325 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 FGGYQ96C11 551 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 TECTBQ96PL2 329 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.51
VAPB-202ENST00000395802 PLGRKTQ9HBL7 147 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 SMURF1Q9HCE7 757 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 V9GYS6 101 aa11.83□□□□□ -0.51
VAPB-202ENST00000395802 MAGEB3O15480 346 aa11.83□□□□□ -0.52
VAPB-202ENST00000395802 CLDN14O95500 239 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms