RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ADAT3Q96EY9 351 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 LYZL4Q96KX0 146 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 NEDD4LQ96PU5 975 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 ZCCHC4Q9H5U6 513 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 MOB1AQ9H8S9 216 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 SLC17A5Q9NRA2 495 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 GLRX2Q9NS18 164 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 V9GY05 133 aa10.64□□□□□ -0.71
SPTBN1-203ENST00000389980 A0A1B0GVI7 797 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 ANXA2P2A6NMY6 339 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 IFITM5A6NNB3 132 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 PDCD5O14737 125 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 TPPPO94811 219 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 TOXO94900 526 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 CCL2P13500 99 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 MPGP29372 298 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 PER3P56645 1201 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 PRSS12P56730 875 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 P2RY14Q15391 338 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 TSC22D1Q15714 1073 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 NRN1LQ496H8 165 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 MZT2AQ6P582 158 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 UNQ6494/PRO21346Q6UXR6 183 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 IDO2Q6ZQW0 420 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 ZNF627Q7L945 461 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 SAMD12Q8N8I0 201 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 PLPP7Q8NBV4 271 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 TRMT10AQ8TBZ6 339 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 TRAF4Q9BUZ4 470 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 ZNF275Q9NSD4 429 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 FAM215AQ9Y5M1 114 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 A0A1W2PR80 420 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 LYZL6O75951 148 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 EIF4EP06730 217 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 CSF3P09919 207 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 ELK1P19419 428 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 IGHV1-2P23083 117 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 CFL1P23528 166 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 GNALP38405 381 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 TDGF1P3P51864 188 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 PPP3R1P63098 170 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 SPOCK1Q08629 439 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 SLC36A2Q495M3 483 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 KRTCAP3Q53RY4 240 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 DMRTC1Q5HYR2 192 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 ATAD3CQ5T2N8 411 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 XKRXQ6PP77 449 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 NRARPQ7Z6K4 114 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 OR1K1Q8NGR3 316 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 OR2AE1Q8NHA4 323 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 ZCCHC14Q8WYQ9 949 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 SNRNP40Q96DI7 357 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 KCNN3Q9UGI6 736 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 NBASA2RRP1 2371 aa10.63□□□□□ -0.71
SPTBN1-203ENST00000389980 AIPO00170 330 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 ICMTO60725 284 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 LCATP04180 440 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 IGFBP3P17936 291 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 CCNOP22674 350 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 RAB1AP62820 205 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 IL18Q14116 193 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 STK11Q15831 433 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 SLC51BQ86UW2 128 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 LIX1LQ8IVB5 337 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 CCDC28AQ8IWP9 274 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 NAXEQ8NCW5 288 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 ZNF671Q8TAW3 534 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 ACOT12Q8WYK0 555 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 BCL2L2Q92843 193 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 FAM122AQ96E09 287 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 ASF1BQ9NVP2 202 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 LOC100509620A0A075B734 347 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 HMX3A6NHT5 357 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 SHOXO15266 292 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 RAD51DO75771 328 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 TNFSF13O75888 250 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 PRKACBP22694 351 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 RFX2P48378 723 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 NKX2-5P52952 324 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 ECH1Q13011 328 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 FAM57AQ8TBR7 257 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 THRSPQ92748 146 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 KCTD12Q96CX2 325 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 OPN3Q9H1Y3 402 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 LIN7BQ9HAP6 207 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 CKLFQ9UBR5 152 aa10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-203ENST00000389980 RELNP78509 3460 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 KALRNO60229 2985 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 PKD1L2Q7Z442 2459 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 MED19A0JLT2 244 aaPredicted RBP10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 MBD3L4A6NDZ8 208 aaPredicted RBP10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 MBD3L3A6NE82 208 aaPredicted RBP10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 MBD3L5A6NJ08 208 aaPredicted RBP10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 EVX1P49640 407 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 KRTAP27-1Q3LI81 207 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 TBRG1Q3YBR2 411 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 OR2A2Q6IF42 318 aa10.61□□□□□ -0.71
SPTBN1-203ENST00000389980 ANKRD16Q6P6B7 361 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms