RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PNPLA2Q96AD5 504 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 TMEM41AQ96HV5 264 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 CYYR1Q96J86 154 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 LYZL4Q96KX0 146 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 PIGQQ9BRB3 760 aa16.5■□□□□ 0.23
USP49-202ENST00000373010 A0A0A6YYD4 124 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 M0R233 179 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 DHHO43323 396 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 VAMP5O95183 116 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 NR2C1P13056 603 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 OR3A3P47888 321 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 B3GALT5-AS1P59052 145 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 OPCMLQ14982 345 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 POU4F3Q15319 338 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 RSPO4Q2I0M5 234 aaPredicted RBP16.49■□□□□ 0.23
USP49-202ENST00000373010 PGAP1Q75T13 922 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 DTX1Q86Y01 620 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 ARMC10Q8N2F6 343 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 OR10R2Q8NGX6 335 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 C1orf147Q96MC9 270 aaPredicted RBP16.49■□□□□ 0.23
USP49-202ENST00000373010 SLC25A21Q9BQT8 299 aaPredicted RBP16.49■□□□□ 0.23
USP49-202ENST00000373010 ALX4Q9H161 411 aaPredicted RBP16.49■□□□□ 0.23
USP49-202ENST00000373010 BANF2Q9H503 90 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 PCSK5Q92824 1860 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 LOC100509620A0A075B734 347 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 IGKV1-9A0A0C4DH69 117 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 F5H5P2 479 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 MPIG6BO95866 241 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 P04436 131 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 SLC6A9P48067 706 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 GJC3Q8NFK1 279 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 OR14K1Q8NGZ2 314 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 LPAR5Q9H1C0 372 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 ZNF107Q9UII5 783 aaPredicted RBP16.49■□□□□ 0.23
USP49-202ENST00000373010 FBXO4Q9UKT5 387 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 FREM2Q5SZK8 3169 aa16.49■□□□□ 0.23
USP49-202ENST00000373010 A0A1W2PP11 408 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 L7N2F9 121 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 SMAD9O15198 467 aaKnown RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 IGHEP01854 428 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 RFPL3SP0C7P2 107 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 LIPCP11150 499 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 NFYAP23511 347 aaPredicted RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 RSPO1Q2MKA7 263 aaPredicted RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 THOC7Q6I9Y2 204 aaKnown RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 FOXL2NBQ6ZUU3 175 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 CCDC107Q8WV48 283 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 SGCZQ96LD1 299 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 NECAB3Q96P71 396 aaPredicted RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 FBLN5Q9UBX5 448 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 FOXD3Q9UJU5 478 aaPredicted RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 OR14I1A6ND48 311 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 LEUTXA8MZ59 168 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 SSX5O60225 188 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 F10P00742 488 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 IFNA7P01567 189 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 CTSSP25774 331 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 ZNF133P52736 654 aaPredicted RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 CXADRP78310 365 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 RNASE10Q5GAN6 216 aaKnown RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 C11orf88Q6PI97 169 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 C6orf15Q6UXA7 325 aaPredicted RBP16.48■□□□□ 0.23
USP49-202ENST00000373010 ESX1Q8N693 406 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 OR14L1PQ8NHC6 308 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 NPRL2Q8WTW4 380 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 ULBP2Q9BZM5 246 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 ARRDC1-AS1Q9H2J1 176 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 KCNK7Q9Y2U2 307 aa16.48■□□□□ 0.23
USP49-202ENST00000373010 DISC1C4P0D8 188 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 MCRIP1C9JLW8 97 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 DBHP09172 617 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 GPER1Q99527 375 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 EDEM2Q9BV94 578 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 TMPRSS13Q9BYE2 586 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 SOCS1O15524 211 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 SRD5A2P31213 254 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 MEF2DQ14814 521 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 BEST3Q8N1M1 668 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 C12orf45Q8N5I9 185 aaPredicted RBP16.47■□□□□ 0.23
USP49-202ENST00000373010 MRGPRFQ96AM1 343 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 IFT46Q9NQC8 304 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 UBQLN2Q9UHD9 624 aa16.47■□□□□ 0.23
USP49-202ENST00000373010 H3BUI4 141 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 ARPC5O15511 151 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 CDC14BO60729 498 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 NTF4P34130 210 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 MPLP40238 635 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 STARP49675 285 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 CHAF1BQ13112 559 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 FAM109AQ8N4B1 249 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 OR5D18Q8NGL1 313 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 FBXO17Q96EF6 278 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 SFXN2Q96NB2 322 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 MYO7BQ6PIF6 2116 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 FXYD6-FXYD2A0A087WZ82 144 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 HRH1P35367 487 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 CD96P40200 585 aa16.46■□□□□ 0.23
USP49-202ENST00000373010 SEC61A1P61619 476 aaKnown RBP16.46■□□□□ 0.23
USP49-202ENST00000373010 PLAC9Q5JTB6 97 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms