RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 M0QYG6 137 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 SYNGR2O43760 224 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 EPPINO95925 133 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 ARG1P05089 322 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 THBDP07204 575 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 CRISP2P16562 243 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 SOX2P48431 317 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 LUMP51884 338 aaPredicted RBP3.65□□□□□ -1.83
USH2A-202ENST00000366942 KRBOX4Q5JUW0 171 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 FAM122CQ6P4D5 195 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 MARCH3Q86UD3 253 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 AMIGO3Q86WK7 504 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 ACBD7Q8N6N7 88 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 OR5AK2Q8NH90 309 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 LHFPL5Q8TAF8 219 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TCP10LQ8TDR4 215 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TMED6Q8WW62 240 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TMEM45BQ96B21 275 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 METTL26Q96S19 204 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 VN1R1Q9GZP7 353 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 C19orf12Q9NSK7 152 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 DCAF13Q9NV06 445 aaKnown RBP3.65□□□□□ -1.83
USH2A-202ENST00000366942 CTSFQ9UBX1 484 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TMEM131LA2VDJ0 1609 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 PPIAL4CA0A0B4J2A2 164 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 A0A1W2PRX2 142 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 UCHL1P09936 223 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 PPIAL4GP0DN37 164 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 GLRXP35754 106 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 CD96P40200 585 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 CDKN2BP42772 138 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 CR1LQ2VPA4 569 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 NCBP2-AS2Q69YL0 99 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 PAQR6Q6TCH4 344 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 LIMS2Q7Z4I7 341 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 NRARPQ7Z6K4 114 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TMEM116Q8NCL8 245 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 OR8H1Q8NGG4 311 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 HARBI1Q96MB7 349 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 EMC7Q9NPA0 242 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 RAB26Q9ULW5 256 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 RNF11Q9Y3C5 154 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 RHBDD3Q9Y3P4 386 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 SHPRHQ149N8 1683 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TSPAN11A1L157 253 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 HMGN2P05204 90 aaKnown RBP3.65□□□□□ -1.83
USH2A-202ENST00000366942 OR5G3P0C626 314 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 BMP2P12643 396 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 PYCR1P32322 319 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 DUSP5Q16690 384 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TM4SF20Q53R12 229 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TMEM268Q5VZI3 342 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 LCN12Q6JVE5 192 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 GLRX5Q86SX6 157 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 TMEM104Q8NE00 496 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 C20orf85Q9H1P6 137 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 PPA2Q9H2U2 334 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 FSCN3Q9NQT6 498 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 ADAMTS6Q9UKP5 1117 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 KLK4Q9Y5K2 254 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 SLCO1B1Q9Y6L6 691 aa3.65□□□□□ -1.83
USH2A-202ENST00000366942 DIDO1Q9BTC0 2240 aaKnown RBP3.65□□□□□ -1.83
USH2A-202ENST00000366942 RAB27BO00194 218 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 CHEK1O14757 476 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 AIFM1O95831 613 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 MT-ND4P03905 459 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 SRMP19623 302 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 ETV5P41161 510 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 RPL31P62899 125 aaKnown RBP3.64□□□□□ -1.83
USH2A-202ENST00000366942 TUBA1BP68363 451 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 TUBA4AP68366 448 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 ELF3P78545 371 aaPredicted RBP3.64□□□□□ -1.83
USH2A-202ENST00000366942 MRPS34P82930 218 aaKnown RBP3.64□□□□□ -1.83
USH2A-202ENST00000366942 CNPY1Q3B7I2 92 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 TMEM177Q53S58 311 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 AKR1C8PQ5T2L2 129 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 OR10K2Q6IF99 312 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 DRAM2Q6UX65 266 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 DPY19L2P2Q6ZN68 376 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 CCDC190Q86UF4 302 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 OR2T10Q8NGZ9 312 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 GRPEL2Q8TAA5 225 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 NAT14Q8WUY8 206 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 TSLPQ969D9 159 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 RDH12Q96NR8 316 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 TBX5Q99593 518 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 TUBA1CQ9BQE3 449 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 MIEN1Q9BRT3 115 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 DGCR6LQ9BY27 220 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 OR2S2Q9NQN1 319 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 TUBA8Q9NY65 449 aaPredicted RBP3.64□□□□□ -1.83
USH2A-202ENST00000366942 ALG1L2C9J202 215 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 K7ESF4 209 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 ISLRO14498 428 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 SLC22A1O15245 554 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 GBAP04062 536 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 CD59P13987 128 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 CHATP28329 748 aa3.64□□□□□ -1.83
USH2A-202ENST00000366942 CEBPGP53567 150 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms