RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RPS27P42677 84 aaKnown RBP11.21□□□□□ -0.61
DDX39A-202ENST00000324340 PITPNBP48739 271 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF84P51523 738 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 TAS2R43P59537 309 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 RAP2BP61225 183 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 LSM6P62312 80 aaKnown RBP11.21□□□□□ -0.61
DDX39A-202ENST00000324340 FGL1Q08830 312 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 KLRB1Q12918 225 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 TRAM1Q15629 374 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 HSPB2Q16082 182 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 GSG1Q2KHT4 349 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 NRN1LQ496H8 165 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 TSPO2Q5TGU0 170 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 SLC18B1Q6NT16 456 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 PGAP1Q75T13 922 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 LINGO2Q7L985 606 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 P4HA3Q7Z4N8 544 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 KLBQ86Z14 1044 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 CDH26Q8IXH8 852 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 UBE2J2Q8N2K1 259 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-202ENST00000324340 TEX19Q8NA77 164 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 OR10H5Q8NGA6 315 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 OR5M9Q8NGP3 310 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 FAM57AQ8TBR7 257 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 HAVCR2Q8TDQ0 301 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 ST7LQ8TDW4 575 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 APH1AQ96BI3 265 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 SNRNP40Q96DI7 357 aaKnown RBP11.21□□□□□ -0.61
DDX39A-202ENST00000324340 PELI1Q96FA3 418 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 NELFAQ9H3P2 528 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 GPR35Q9HC97 309 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 EXTL2Q9UBQ6 330 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 PURGQ9UJV8 347 aaKnown RBP11.21□□□□□ -0.61
DDX39A-202ENST00000324340 PLSCR5A0PG75 271 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 HMSDA8MTL9 139 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 J3QLW9 94 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 RGS11O94810 467 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 NMBP08949 121 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF19P17023 458 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 EDNRAP25101 427 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 CDAP32320 146 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 RPS25P62851 125 aaKnown RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 TP53I3Q53FA7 332 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 FAM27BQ5VT28 67 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 OTPQ5XKR4 325 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 OR2A2Q6IF42 318 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 RHOUQ7L0Q8 258 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF627Q7L945 461 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 NUFIP2Q7Z417 695 aaKnown RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 GLCCI1Q86VQ1 547 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 OR52N5Q8NH56 324 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF837Q96EG3 531 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 ALKBH3Q96Q83 286 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 AMELYQ99218 206 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 ABHD6Q9BV23 337 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 RBM24Q9BX46 236 aaKnown RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 SEC61A2Q9H9S3 476 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 CRLF2Q9HC73 371 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 BIN3Q9NQY0 253 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 SLC7A10Q9NS82 523 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 TMEM38BQ9NVV0 291 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 MRM2Q9UI43 246 aaKnown RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 LHFPL6Q9Y693 200 aa11.2□□□□□ -0.62
DDX39A-202ENST00000324340 ANKRD11Q6UB99 2663 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-202ENST00000324340 FIGNL2A6NMB9 653 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 E9PI62 339 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 H7C2Y5 167 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-202ENST00000324340 MAGEB4O15481 346 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-202ENST00000324340 OGG1O15527 345 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 PLPP2O43688 288 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 CD1AP06126 327 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 TACSTD2P09758 323 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 IGF2RP11717 2491 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 MSR1P21757 451 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 GUCA1AP43080 201 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-202ENST00000324340 OR3A2P47893 321 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 FABP5Q01469 135 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 EIF2B1Q14232 305 aaKnown RBP11.19□□□□□ -0.62
DDX39A-202ENST00000324340 CEACAM16Q2WEN9 425 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 ELFN2Q5R3F8 820 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 METTL11BQ5VVY1 283 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 RTL6Q6ICC9 239 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF585AQ6P3V2 769 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 KCTD18Q6PI47 426 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-202ENST00000324340 DEGS2Q6QHC5 323 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 RPTNQ6XPR3 784 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 FAM214BQ7L5A3 538 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 DCXRQ7Z4W1 244 aa11.19□□□□□ -0.62
DDX39A-202ENST00000324340 ZNF679Q8IYX0 411 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms