RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SLC25A4P12235 298 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 NFYBP25208 207 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 BLOC1S1P78537 153 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 QRFPP83859 136 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 CDCP2Q5VXM1 449 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ZFP82Q8N141 532 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 LIN37Q96GY3 246 aaPredicted RBP17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ASH2LQ9UBL3 628 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 TMEM218A2RU14 115 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ZNF814B7Z6K7 855 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 H3BMH7 237 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 HOXB5P09067 269 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ID4P47928 161 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 PNLIPRP2P54317 469 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 RNF4P78317 190 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 NKAPLQ5M9Q1 402 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 SLC22A24Q8N4F4 322 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 C2CD4CQ8TF44 421 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 RNF133Q8WVZ7 376 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ARHGAP5-AS1Q96IT6 56 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 SLC6A15Q9H2J7 730 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ACKR4Q9NPB9 350 aa17.6■□□□□ 0.41
CRLF3-201ENST00000324238 ZNF705EA8MWA4 302 aaPredicted RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 LMO7DNF2Z398 122 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 CRTAPO75718 401 aaPredicted RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 SNAPC5O75971 98 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 FARS2O95363 451 aaKnown RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 HCKP08631 526 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 ZNF20P17024 532 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 RAB3AP20336 220 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 GLRA1P23415 457 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 GALNSP34059 522 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 SFTPDP35247 375 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 HNRNPKP61978 463 aaKnown RBP eCLIP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 C5orf66Q9H5L9 145 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 SLC2A4RGQ9NR83 387 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 COL4A2P08572 1712 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 LOC390937A0A1W2PQ73 354 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 E9PLN8 166 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 AIMP2Q13155 320 aaKnown RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 ARFRP1Q13795 201 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 SGCAQ16586 387 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 HAGHLQ6PII5 290 aaPredicted RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 CLEC9AQ6UXN8 241 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 C1QL2Q7Z5L3 287 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 EDAQ92838 391 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 PIK3IP1Q96FE7 263 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 LPAR5Q9H1C0 372 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 GPR84Q9NQS5 396 aa17.59■□□□□ 0.41
CRLF3-201ENST00000324238 MRPS28Q9Y2Q9 187 aaKnown RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 NCOA6Q14686 2063 aaPredicted RBP17.59■□□□□ 0.41
CRLF3-201ENST00000324238 A0A1B0GW55 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 LILRA5A6NI73 299 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 TMEM200CA6NKL6 621 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 TIAF1O95411 115 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 KNG1P01042 644 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 ISG15P05161 165 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4L2P0CJ85 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4L3P0CJ86 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4L4P0CJ87 422 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4L5P0CJ88 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4L6P0CJ89 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4L7P0CJ90 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 HSD11B1P28845 292 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 TMEM50BP56557 158 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 S100A10P60903 97 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 TDGQ13569 410 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 ZNF345Q14585 488 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 ZNF585AQ6P3V2 769 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 OR10C1Q96KK4 312 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 DUX4Q9UBX2 424 aa17.58■□□□□ 0.41
CRLF3-201ENST00000324238 TTLL8A6PVC2 850 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 IL2RAP01589 272 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 GIMD1P0DJR0 217 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 NPBWR1P48145 328 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 NAXEQ8NCW5 288 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 OR5D14Q8NGL3 314 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 TMEM230Q96A57 120 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 RAB3CQ96E17 227 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 SERINC1Q9NRX5 453 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 KLRF1Q9NZS2 232 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 DHPSP49366 369 aaPredicted RBP17.58■□□□□ 0.4
CRLF3-201ENST00000324238 TOMM20Q15388 145 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 ANKRD55Q3KP44 614 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 DRAM2Q6UX65 266 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 CLEC18BQ6UXF7 455 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 FAM57BQ71RH2 274 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 SLC25A45Q8N413 288 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 NKAIN3Q8N8D7 197 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 PNLDC1Q8NA58 520 aaKnown RBP17.58■□□□□ 0.4
CRLF3-201ENST00000324238 OR4A4PQ8NGN8 299 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 STT3BQ8TCJ2 826 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 DNTTIP1Q9H147 329 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 METTL8Q9H825 291 aaKnown RBP17.58■□□□□ 0.4
CRLF3-201ENST00000324238 SLC22A11Q9NSA0 550 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 LHFPL6Q9Y693 200 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 FAM186AA6NE01 2351 aa17.58■□□□□ 0.4
CRLF3-201ENST00000324238 A0A1W2PQD3 144 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 RCC1P18754 421 aaPredicted RBP17.57■□□□□ 0.4
CRLF3-201ENST00000324238 AKR1C3P42330 323 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms