RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 LCN2P80188 198 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF273Q14593 569 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ABHD15Q6UXT9 468 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 RTL10Q7L3V2 364 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ISCA2Q86U28 154 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 MTMR14Q8NCE2 650 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 GALMQ96C23 342 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 KTI12Q96EK9 354 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-201ENST00000297405 ELOVL3Q9HB03 270 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 KIAA1456Q9P272 454 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 NAGKQ9UJ70 344 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 SLC5A6Q9Y289 635 aa4.43□□□□□ -1.7
CSMD3-201ENST00000297405 DHRS7CA6NNS2 312 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 DIRC3C9JPN6 131 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 BMPR1BO00238 502 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ENSAO43768 121 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 IL33O95760 270 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SEC11BP0C7V7 166 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HAPLN1P10915 354 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FOLR2P14207 255 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 AOAHP28039 575 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FOXK1P85037 733 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GAMTQ14353 236 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 NCBP2-AS2Q69YL0 99 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR52I1Q8NGK6 324 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR5AK3PQ8NH89 298 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 APOBEC4Q8WW27 367 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 C10orf35Q96D05 121 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 BPIFA1Q9NP55 256 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PHLPP1O60346 1717 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GLCEO94923 617 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GUSBP08236 651 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SNHG28P0DPA3 235 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ERGP11308 486 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 UBE2NP61088 152 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF687Q8N1G0 1237 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR5D18Q8NGL1 313 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 MRGPRX2Q96LB1 330 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ADAT1Q9BUB4 502 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HAO2Q9NYQ3 351 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR1A1Q9P1Q5 309 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CACNG5Q9UF02 275 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ANKRD20A5PA0PJZ0 165 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR2T8A6NH00 312 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM233B4DJY2 109 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SLC35E2P0CK97 266 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 UNC50Q53HI1 259 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FAM109BQ6ICB4 259 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SLC25A43Q8WUT9 341 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ORAI1Q96D31 301 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HES4Q9HCC6 221 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PIEZO1Q92508 2521 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CCL15-CCL14A0A0B4J2E2 113 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM269A0A1B0GVZ9 245 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GPX2P18283 190 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 THBS4P35443 961 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF140P52738 457 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CYHR1Q6ZMK1 362 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RNF111Q6ZNA4 994 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR5AR1Q8NGP9 310 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FAM131CQ96AQ9 280 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ADAT3Q96EY9 351 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SLC35A4Q96G79 324 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 DNMT3BQ9UBC3 853 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR5V1Q9UGF6 321 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ZSWIM8A7E2V4 1837 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 MAN2B1O00754 1011 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 POU2F2P09086 479 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PIRTP0C851 137 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CLDN10P78369 228 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SRSF9Q13242 221 aaKnown RBP eCLIP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HNRNPA1L2Q32P51 320 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 BSXQ3C1V8 233 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM81Q6P7N7 255 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 USP50Q70EL3 339 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 MFSD4AQ8N468 514 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PRSS3P2Q8NHM4 247 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 UBE2ZQ9H832 354 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 INIPQ9NRY2 104 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TREX1Q9NSU2 369 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GALR3O60755 368 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FCARP24071 287 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 APLNRP35414 380 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RELQ04864 619 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CST9Q5W186 159 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 BEND2Q8NDZ0 799 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 YIPF6Q96EC8 236 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 MBOAT4Q96T53 435 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PSG11Q9UQ72 335 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PRF1P14222 555 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CASP7P55210 303 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RPS21P63220 83 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SEC11AP67812 179 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SHBQ15464 509 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SYT14P1Q58G82 188 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 DCBLD1Q8N8Z6 715 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SGK494Q96LW2 274 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 P2RY12Q9H244 342 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 PDZD7Q9H5P4 517 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms