RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Lat2Q9JHL0 203 aa5.68□□□□□ -1.5
Lig4-202ENSMUST00000170033 PrndQ9QUG3 179 aa5.68□□□□□ -1.5
Lig4-202ENSMUST00000170033 Ckap5A2AGT5 2032 aaKnown RBP5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Igkv12-38A0A0G2JEI7 115 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Mettl8A2AUU0 281 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Adamts3E9Q287 1204 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm16434J3QN10 205 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm8356J3QPD3 205 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Olfr1329L7MTV4 313 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 4930555G01RikL7N253 205 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 DxoO70348 397 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Clec3bP43025 202 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 ptchd1Q14B62 888 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Fam109bQ14B98 259 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Zfp36l3Q5ISE2 725 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 5730522E02RikQ5SP45 163 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Il11ra1Q64385 432 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Rcor3Q6PGA0 451 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Ccsmst1Q6RUT7 136 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Calm5Q6W3E0 140 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Ffar4Q7TMA4 361 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Olfr1115Q7TR53 326 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Prss34Q80UR4 318 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Serinc5Q8BHJ6 461 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Q8BN57 294 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Banf2Q8BVR0 90 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Ifi27Q8C6G0 260 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 SinhcafQ8C8M1 221 aaKnown RBP5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Flywch1Q8CI03 673 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Slc22a22Q8R0S9 554 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Olfr514Q8VFZ6 310 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Olfr686Q8VGX3 317 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Uxs1Q91XL3 420 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Rab30Q923S9 203 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 MpiQ924M7 423 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 4933400A11RikQ9CR52 288 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Vmn1r40Q9EQ46 310 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 FcrlsQ9EQY5 509 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Rai1Q61818 1889 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Usp34Q6ZQ93 3582 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Wdr90Q6ZPG2 1874 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm29276A0A087WNW5 222 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm20792A0A087WRF5 222 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm28490A0A087WRT9 222 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm21996A0A087WSS9 222 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Ighv1-24A0A0A6YY24 117 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Igkv9-123A0A140T8N8 117 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Olfr1223A0A1L1SU13 311 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Ldlrad3A2AR95 345 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm5878E9PUB3 99 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Omt2aF6ZJR3 104 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Dbx2F8VQH7 377 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm6882J3KMT3 313 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Prdx4O08807 274 aaKnown RBP5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Mtatp6P00848 226 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Hoxb3P09026 433 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 CfpP11680 464 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gstm3P19639 218 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Rab18P35293 206 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Rab19P35294 217 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 PnmtP40935 295 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Lefty2P57785 368 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Eif4eP63073 217 aaKnown RBP5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 RhodP97348 210 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 C1rlQ3UZ09 482 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gpr165Q3V3A3 455 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Exosc3Q7TQK4 274 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Mgat4aQ812G0 535 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Flrt3Q8BGT1 649 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Peli1Q8C669 418 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 C1sbQ8CFG8 688 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Dhrs7cQ8CHS7 311 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 B3gnt9Q8VI16 399 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Wdr77Q99J09 342 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Mpped2Q9CZJ0 294 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Dapl1Q9D757 107 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Wdr5bQ9D7H2 328 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 DynapQ9D7M5 161 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Alg5Q9DB25 324 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 PmpcaQ9DC61 524 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gpx2Q9JHC0 190 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Raet1dQ9JI58 249 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Mrps34Q9JIK9 218 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Prl3c1Q9QUN5 212 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 MokQ9WVS4 420 aa5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 HnrnpdlQ9Z130 301 aaKnown RBP5.67□□□□□ -1.5
Lig4-202ENSMUST00000170033 Zfp345A2AQA1 561 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm8126E9Q1N7 198 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Oosp3G5E8D7 195 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm21976J3QNN2 249 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Gm8104K7N744 198 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 EdaO54693 391 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Mid1O70583 680 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Cxcl2P10889 100 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 PvalbP32848 110 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Id2P41136 134 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 MazP56671 477 aaKnown RBP5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Rps11P62281 158 aaKnown RBP5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 Nhlrc4Q3UP44 136 aa5.66□□□□□ -1.5
Lig4-202ENSMUST00000170033 D13Ertd608eQ3UPR8 151 aa5.66□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 80.4 ms