RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 TRMT112Q9UI30 125 aaKnown RBP1□□□□□ -2.25
PTP4A2-220ENST00000627328 VANGL2Q9ULK5 521 aa1□□□□□ -2.25
PTP4A2-220ENST00000627328 PIGLQ9Y2B2 252 aa1□□□□□ -2.25
PTP4A2-220ENST00000627328 PEX16Q9Y5Y5 336 aa1□□□□□ -2.25
PTP4A2-220ENST00000627328 SCN4AP35499 1836 aa1□□□□□ -2.25
PTP4A2-220ENST00000627328 AFDNP55196 1824 aaKnown RBP1□□□□□ -2.25
PTP4A2-220ENST00000627328 COL5A3P25940 1745 aaPredicted RBP1□□□□□ -2.25
PTP4A2-220ENST00000627328 WDR90Q96KV7 1748 aa1□□□□□ -2.25
PTP4A2-220ENST00000627328 ANKRD26Q9UPS8 1709 aa1□□□□□ -2.25
PTP4A2-220ENST00000627328 AKAP11Q9UKA4 1901 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CACNA1SQ13698 1873 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 FER1L6Q2WGJ9 1857 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 TRPM7Q96QT4 1865 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 PALLDQ8WX93 1383 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 NUP98P52948 1817 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 DLEC1Q9Y238 1755 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 SEC16AO15027 2179 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 C4AP0C0L4 1744 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 TOGARAM1Q9Y4F4 1720 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 IGHV1-3A0A0C4DH29 117 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 FAM47DPA6NHR8 397 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 C4orf51C9J302 202 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CHMP2AO43633 222 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 EIF1BO60739 113 aaKnown RBP0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 KLHL2O95198 593 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 IGLV3-25P01717 112 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 IGHV3-11P01762 117 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CTSLP07711 333 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CEACAM3P40198 252 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 EIF1P41567 113 aaKnown RBP0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 SYKP43405 635 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 HCAR3P49019 387 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 SSR4P51571 173 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 SYNJ2BPP57105 145 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 GPX6P59796 221 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CDK5Q00535 292 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 ECH1Q13011 328 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 FAM53BQ14153 422 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 DEFB134Q4QY38 66 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 TEX30Q5JUR7 227 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 TICAM2Q86XR7 235 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 ZNF101Q8IZC7 436 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 OR2T34Q8NGX1 318 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CXorf40AQ8TE69 158 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 HGDQ93099 445 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 PSKH2Q96QS6 385 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 PKMYT1Q99640 499 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 TRIM62Q9BVG3 475 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 RMND5AQ9H871 391 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 SH3BGRL2Q9UJC5 107 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 ANKRD12Q6UB98 2062 aa0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 CICQ96RK0 1608 aaPredicted RBP0.99□□□□□ -2.25
PTP4A2-220ENST00000627328 C10orf71Q711Q0 1435 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ARFGEF2Q9Y6D5 1785 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 KIAA1551Q9HCM1 1747 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 NRXN2Q9P2S2 1712 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ADCY9O60503 1353 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PDE4DIPQ5VU43 2346 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ZBED9Q6R2W3 1325 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 CASP8AP2Q9UKL3 1982 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 DLG5Q8TDM6 1919 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 IGHV3-49A0A0A0MS15 119 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PCP4L1A6NKN8 68 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 SEMA3DO95025 777 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PAHP00439 452 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 IFNB1P01574 187 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PFN1P07737 140 aaKnown RBP0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 FUSP35637 526 aaKnown RBP eCLIP0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ACAA2P42765 397 aaKnown RBP0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 TNNT2P45379 298 aaPredicted RBP0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 P2RX1P51575 399 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ADNP2Q6IQ32 1131 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 H2BFWTQ7Z2G1 175 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PSTKQ8IV42 348 aaKnown RBP0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PDIK1LQ8N165 341 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 CMTM2Q8TAZ6 248 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 THRSPQ92748 146 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 RBBP8Q99708 897 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 RAB33BQ9H082 229 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PARP11Q9NR21 331 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ANKRD31Q8N7Z5 1873 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 SLX4Q8IY92 1834 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 SIPA1L3O60292 1781 aaPredicted RBP0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 UBR2Q8IWV8 1755 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 PXDNLA1KZ92 1463 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 TJP1Q07157 1748 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 TIAM2Q8IVF5 1701 aa0.98□□□□□ -2.25
PTP4A2-220ENST00000627328 ADGRA3Q8IWK6 1321 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 USP42Q9H9J4 1324 aaKnown RBP0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 ZSWIM8A7E2V4 1837 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 IGHV3-72A0A0B4J1Y9 119 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 CLRN2A0PK11 232 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 MFNGO00587 321 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 GOSR2O14653 212 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 DPM1O60762 260 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 IGLV2-8P01709 118 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 ARL14EPLP0DKL9 152 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 HRES1P13985 223 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 PSMA5P28066 241 aa0.97□□□□□ -2.25
PTP4A2-220ENST00000627328 IFNA8P32881 189 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms