RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SLC2A2P11168 524 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 CD79AP11912 226 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 IGFBP3P17936 291 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 ADRA2CP18825 462 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 ZNF181Q2M3W8 571 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 AKAP14Q86UN6 197 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 COMMD2Q86X83 199 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 CCDC36Q8IYA8 594 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 CHAC2Q8WUX2 184 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 FGGYQ96C11 551 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 ADAM30Q9UKF2 790 aa15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 NCOA6Q14686 2063 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-224ENST00000600718 MEGF11A6BM72 1044 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 ANXA2P2A6NMY6 339 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 AIPO00170 330 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 PRRG2O14669 202 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 TBX1O43435 398 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 SLC19A2O60779 497 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 TNFSF13O75888 250 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 MAS1P04201 325 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 ATF1P18846 271 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 IGHV1-2P23083 117 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 RAB1AP62820 205 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 SERPINA12Q8IW75 414 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 SLC7A5P1Q8MH63 180 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 PLPP7Q8NBV4 271 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 CPEB3Q8NE35 698 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 STARD4Q96DR4 205 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 POU2F3Q9UKI9 436 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 PROCRQ9UNN8 238 aa15.39■□□□□ 0.05
SHKBP1-224ENST00000600718 E9PLN8 166 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 HPGDSO60760 199 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 TOXO94900 526 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 HOXB1P14653 301 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 PLP2Q04941 152 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 TBRG1Q3YBR2 411 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 SFRP5Q5T4F7 317 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 ASPHD2Q6ICH7 369 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 GFRALQ6UXV0 394 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 MRI1Q9BV20 369 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 TP63Q9H3D4 680 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 PRORYQ9H606 182 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 TAS2R4Q9NYW5 299 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 LMX1BO60663 402 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 CGAP01215 116 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 LCATP04180 440 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 HIKESHIQ53FT3 197 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 Q6ZSR3 168 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 MED12LQ86YW9 2145 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 LYSMD2Q8IV50 215 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 OR5D14Q8NGL3 314 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 OR1J2Q8NGS2 313 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 TRMT10AQ8TBZ6 339 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 DIRAS2Q96HU8 199 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 BOD1Q96IK1 185 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 FAM71F1Q96KD3 344 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 ASF1BQ9NVP2 202 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 B3GNT2Q9NY97 397 aa15.38■□□□□ 0.05
SHKBP1-224ENST00000600718 C5orf63A6NC05 138 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF503-AS2A6NEH8 195 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 RGS13O14921 159 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 ANOS1P23352 680 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 CEACAM8P31997 349 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 DDOSTP39656 456 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 EVX1P49640 407 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 KLRB1Q12918 225 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 OR14K1Q8NGZ2 314 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 SGK3Q96BR1 496 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 LYZL4Q96KX0 146 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF391Q9UJN7 358 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF835Q9Y2P0 537 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 RBMX2Q9Y388 322 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 ARHGAP21Q5T5U3 1957 aa15.37■□□□□ 0.05
SHKBP1-224ENST00000600718 CIB4A0PJX0 185 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 MTRF1O75570 445 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 PTTG1O95997 202 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 CD37P11049 281 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF20P17024 532 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 COX5AP20674 150 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 GNALP38405 381 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 HGFACQ04756 655 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 GABRA6Q16445 453 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 GSG1Q2KHT4 349 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 GFOD2Q3B7J2 385 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 SNAI3Q3KNW1 292 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 HES5Q5TA89 166 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 DOLPP1Q86YN1 238 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF610Q8N9Z0 462 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 C1orf162Q8NEQ5 155 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF671Q8TAW3 534 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 ADAT3Q96EY9 351 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 NOX3Q9HBY0 568 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 SPATA2Q9UM82 520 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 CEP295Q9C0D2 2601 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 MED19A0JLT2 244 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 FABP12A6NFH5 140 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 PAHP00439 452 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 SNRPBP14678 240 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 STOMP27105 288 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 CFPP27918 469 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms