RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TRAV20A0A0B4J274 112 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 TMEM178BH3BS89 294 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 SELENOFO60613 162 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 PAICSP22234 425 aaKnown RBP18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 SLC2A5P22732 501 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 THBS2P35442 1172 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 PMELP40967 661 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 MAB21L1Q13394 359 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 ZMYND11Q15326 602 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 C1orf146Q5VVC0 180 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 MRPL21Q7Z2W9 205 aaKnown RBP18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 DNAJC9Q8WXX5 260 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 UBAP1Q9NZ09 502 aa18.79■□□□□ 0.6
GTF2F1-204ENST00000594965 IGHV3-64DA0A0J9YX35 117 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 CD300LBA8K4G0 201 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 PRODHO43272 600 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 MITFO75030 526 aaPredicted RBP18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 SBK2P0C263 348 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 ANPEPP15144 967 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 PCMT1P22061 227 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 SRP9P49458 86 aaKnown RBP18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 BTG1P62324 171 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 GRB2P62993 217 aaKnown RBP18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 CXXC5Q7LFL8 322 aaKnown RBP18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 SHFQ7M4L6 423 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 PRSS45Q7RTY3 260 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 LRRC28Q86X40 367 aaPredicted RBP18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 PARP8Q8N3A8 854 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 KIF17Q9P2E2 1029 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 AP4S1Q9Y587 144 aa18.78■□□□□ 0.6
GTF2F1-204ENST00000594965 OPRL1P41146 370 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 GATA4P43694 442 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 SLC15A1P46059 708 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 CX3CR1P49238 355 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 TMEM155Q4W5P6 130 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 KLHL12Q53G59 568 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 C1orf229Q6ZS94 237 aaPredicted RBP18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 ASRGL1Q7L266 308 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 AMIGO2Q86SJ2 522 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 MOGAT3Q86VF5 341 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 SPRYD4Q8WW59 207 aaPredicted RBP18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 SPSB4Q96A44 273 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 TOR3AQ9H497 397 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 TVP23BQ9NYZ1 205 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 N6AMT1Q9Y5N5 214 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 WNK2Q9Y3S1 2297 aa18.77■□□□□ 0.6
GTF2F1-204ENST00000594965 PHF1O43189 567 aaPredicted RBP18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 CYB5R3P00387 301 aaPredicted RBP18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 AVPP01185 164 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 FASP25445 335 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 CD200P41217 278 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 RAD23AP54725 363 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 PTGES3Q15185 160 aaKnown RBP18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 SLC35D3Q5M8T2 416 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 RHOUQ7L0Q8 258 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 OTOSQ8NHW6 89 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 LRTOMTQ8WZ04 291 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 GABARAPL1Q9H0R8 117 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 ZNF319Q9P2F9 582 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 KLHDC2Q9Y2U9 406 aa18.76■□□□□ 0.59
GTF2F1-204ENST00000594965 DOCK11Q5JSL3 2073 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 G3V2T6 193 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 IFNL4K9M1U5 179 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 PNPP00491 289 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 CA6P23280 308 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 ZFP36P26651 326 aaKnown RBP18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 HSD11B1P28845 292 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 EPHA2P29317 976 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 SNAPC1Q16533 368 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 ZNF181Q2M3W8 571 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 KDM4DQ6B0I6 523 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 FAHD2BQ6P2I3 314 aaPredicted RBP18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 CELF2-AS1Q8N7Q2 184 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 DVL3Q92997 716 aaPredicted RBP18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 SGK3Q96BR1 496 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 FAHD2AQ96GK7 314 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 PLEKHA8Q96JA3 519 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 TMPRSS13Q9BYE2 586 aa18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 PATZ1Q9HBE1 687 aaKnown RBP18.75■□□□□ 0.59
GTF2F1-204ENST00000594965 MXRA5Q9NR99 2828 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 CCDC182A6NF36 153 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 GGT3PA6NGU5 568 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 F5H0A9 414 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 XRCC2O43543 280 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 ZNF205O95201 554 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 ANXA2P07355 339 aaKnown RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 SRP14P37108 136 aaKnown RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 NAA10P41227 235 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 ZNF121P58317 390 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 SEC61A1P61619 476 aaKnown RBP18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 ESRRGP62508 458 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 APOFQ13790 326 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 PRAMEF6Q5VXH4 476 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 SPICQ8N5J4 248 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 ZNF454Q8N9F8 522 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 OR56B2PQ8NGI1 322 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 TEX12Q9BXU0 123 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 TMEM165Q9HC07 324 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 KRT84Q9NSB2 600 aa18.74■□□□□ 0.59
GTF2F1-204ENST00000594965 DNAJC27Q9NZQ0 273 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms