RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 MVKQ03426 396 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 ZNF92Q03936 586 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 KPNB1Q14974 876 aaKnown RBP11.8□□□□□ -0.52
GGA3-215ENST00000582821 AVPI1Q5T686 147 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 C12orf73Q69YU5 71 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 MRPL21Q7Z2W9 205 aaKnown RBP11.8□□□□□ -0.52
GGA3-215ENST00000582821 PEG10Q86TG7 708 aaKnown RBP11.8□□□□□ -0.52
GGA3-215ENST00000582821 PRIMA1Q86XR5 153 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 CELF2-AS1Q8N7Q2 184 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 PYDC1Q8WXC3 89 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 OR2V2Q96R30 315 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 AMELYQ99218 206 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 SEMA6AQ9H2E6 1030 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 OPA3Q9H6K4 179 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 TMEM106BQ9NUM4 274 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 OAZ3Q9UMX2 235 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 PPP1R3CQ9UQK1 317 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 NPTNQ9Y639 398 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 ARHGAP32A7KAX9 2087 aa11.8□□□□□ -0.52
GGA3-215ENST00000582821 C5orf63A6NC05 138 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 CCDC182A6NF36 153 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 FAM157AC9JC47 383 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 H0YL77 283 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 H3BNX3 289 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 MLNRO43193 412 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 PRKYO43930 277 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 SELENOFO60613 162 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 LYNP07948 512 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 ANPEPP15144 967 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 ALOX5APP20292 161 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 ANOS1P23352 680 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 DDOSTP39656 456 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 GATA4P43694 442 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 CX3CR1P49238 355 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 SRP9P49458 86 aaKnown RBP11.79□□□□□ -0.52
GGA3-215ENST00000582821 APOFQ13790 326 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 ZNF181Q2M3W8 571 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 GLYATL3Q5SZD4 288 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 AADACL4Q5VUY2 407 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 SPATC1Q76KD6 591 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 SLC16A9Q7RTY1 509 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 TMEM163Q8TC26 289 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 THEM6Q8WUY1 208 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 SPRYD4Q8WW59 207 aaPredicted RBP11.79□□□□□ -0.52
GGA3-215ENST00000582821 MEGF10Q96KG7 1140 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 CIB1Q99828 191 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 BEX2Q9BXY8 128 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 SHARPINQ9H0F6 387 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 NARFLQ9H6Q4 476 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 NIPAL2Q9H841 368 aa11.79□□□□□ -0.52
GGA3-215ENST00000582821 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
GGA3-215ENST00000582821 GMDSO60547 372 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 FSTL3O95633 263 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 IGHV2-70P01814 119 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 IGHV2-5P01817 119 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 H2BFMP0C1H6 154 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 SLC2A1P11166 492 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 PCMT1P22061 227 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 HSD11B1P28845 292 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 RPS7P62081 194 aaKnown RBP11.78□□□□□ -0.52
GGA3-215ENST00000582821 FAM120AOSQ5T036 256 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 LCN1P1Q5VSP4 162 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 MEPCEQ7L2J0 689 aaKnown RBP11.78□□□□□ -0.52
GGA3-215ENST00000582821 LRRC28Q86X40 367 aaPredicted RBP11.78□□□□□ -0.52
GGA3-215ENST00000582821 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 TCEANCQ8N8B7 351 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 BHLHE23Q8NDY6 225 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 OR10AD1Q8NGE0 317 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 OR52H1Q8NGJ2 320 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 OR2AE1Q8NHA4 323 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 ERGIC1Q969X5 290 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 SGK3Q96BR1 496 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 RAB39BQ96DA2 213 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 SIGLEC11Q96RL6 698 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 PKP2Q99959 881 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 RBM4BQ9BQ04 359 aaKnown RBP11.78□□□□□ -0.52
GGA3-215ENST00000582821 GABARAPL3Q9BY60 117 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 RGCCQ9H4X1 137 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 ZNF665Q9H7R5 613 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 HAO2Q9NYQ3 351 aa11.78□□□□□ -0.52
GGA3-215ENST00000582821 MRPL15Q9P015 296 aaKnown RBP11.78□□□□□ -0.52
GGA3-215ENST00000582821 H2AFY2Q9P0M6 372 aaPredicted RBP11.78□□□□□ -0.52
GGA3-215ENST00000582821 GGT3PA6NGU5 568 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 F5H5P2 479 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 TMEM178BH3BS89 294 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 PTBP3O95758 552 aaKnown RBP11.77□□□□□ -0.53
GGA3-215ENST00000582821 HLA-DPB1P04440 258 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 ANXA2P07355 339 aaKnown RBP11.77□□□□□ -0.53
GGA3-215ENST00000582821 MSMBP08118 114 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 CFL1P23528 166 aaKnown RBP11.77□□□□□ -0.53
GGA3-215ENST00000582821 CPT2P23786 658 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 CD200P41217 278 aa11.77□□□□□ -0.53
GGA3-215ENST00000582821 NAA10P41227 235 aaPredicted RBP11.77□□□□□ -0.53
GGA3-215ENST00000582821 PRSS12P56730 875 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms