RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ZFP36P26651 326 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 MDH2P40926 338 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 PRKXP51817 358 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 RAD23AP54725 363 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 SEC61A1P61619 476 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 GINS1Q14691 196 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 SNAI3Q3KNW1 292 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 TMEM155Q4W5P6 130 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 C1orf146Q5VVC0 180 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 LRRC28Q86X40 367 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 MUC20Q8N307 709 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 OR2AE1Q8NHA4 323 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF418Q8TF45 676 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 SLAMF6Q96DU3 332 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 NMNAT2Q9BZQ4 307 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF556Q9HAH1 456 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 PATZ1Q9HBE1 687 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 GGT3PA6NGU5 568 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 IFNL4K9M1U5 179 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 SLC2A1P11166 492 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 IRF2P14316 349 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 CA6P23280 308 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 GRK5P34947 590 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 SLC25A1P53007 311 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 EIF2B1Q14232 305 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 OR8G1Q15617 311 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 ESCO2Q56NI9 601 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 DRAM2Q6UX65 266 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 C1QL2Q7Z5L3 287 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 ERI1Q8IV48 349 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 NANPQ8TBE9 248 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 UTP4Q969X6 686 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 CMC2Q9NRP2 79 aa10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 DDX28Q9NUL7 540 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-213ENST00000573519 CEACAM18A8MTB9 384 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF878C9JN71 531 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 TBX1O43435 398 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 VENTXO95231 258 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 OSMP13725 252 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 ANXA8P13928 327 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 RPS2P15880 293 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 HSD11B1P28845 292 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 BLVRAP53004 296 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF92Q03936 586 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 GLYATL3Q5SZD4 288 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 PRAMEF6Q5VXH4 476 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 TMEM236Q5W0B7 351 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 AMIGO2Q86SJ2 522 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 C1orf87Q8N0U7 546 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 BPIFB2Q8N4F0 458 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 OR11L1Q8NGX0 322 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 OR6N2Q8NGY6 317 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 INTS14Q96SY0 518 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 KCNJ15Q99712 375 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 ADAT1Q9BUB4 502 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 OR51V1Q9H2C8 321 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 MMP26Q9NRE1 261 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 UFSP2Q9NUQ7 469 aa10.67□□□□□ -0.7
NPLOC4-213ENST00000573519 DYSFO75923 2080 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 PPIAL4EA0A075B759 164 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 A0A0A6YYJ9 748 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 C5orf63A6NC05 138 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 PPIAL4DF5H284 164 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 MITFO75030 526 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 CIB2O75838 187 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 ANXA2P07355 339 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 PPIAL4FP0DN26 164 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 PAICSP22234 425 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 ANOS1P23352 680 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 GSTT1P30711 240 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 SLC15A1P46059 708 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 CX3CR1P49238 355 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 DAPP51397 102 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 MAB21L1Q13394 359 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 ATP6AP1Q15904 470 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 ARMCX4Q5H9R4 360 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 FAM201AQ5SY85 155 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 LINC01590Q5TEZ4 76 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 ASRGL1Q7L266 308 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 DPY19L4Q7Z388 723 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 OR5K1Q8NHB7 308 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 C22orf15Q8WYQ4 148 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 DVL3Q92997 716 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 SLC6A7Q99884 636 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 MRI1Q9BV20 369 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 TMEM165Q9HC07 324 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 DNAJC27Q9NZQ0 273 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 KIF17Q9P2E2 1029 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 OR5V1Q9UGF6 321 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 OPN4Q9UHM6 478 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 PPIAL4AQ9Y536 164 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 AP4S1Q9Y587 144 aa10.66□□□□□ -0.7
NPLOC4-213ENST00000573519 PRR23D1E9PI22 279 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 F5H0A9 414 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 TRAPPC2LH3BP13 241 aa10.65□□□□□ -0.7
NPLOC4-213ENST00000573519 HAX1O00165 279 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms