RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C12orf49Q9H741 205 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 PPP1R3EQ9H7J1 279 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 LIN7BQ9HAP6 207 aa12.06□□□□□ -0.48
TPM1-215ENST00000558868 USP9XQ93008 2570 aaPredicted RBP12.06□□□□□ -0.48
TPM1-215ENST00000558868 LOC390937A0A1W2PQ73 354 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 WDR1O75083 606 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 TPPPO94811 219 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 IGLV3-1P01715 115 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 EIF4EP06730 217 aaKnown RBP12.05□□□□□ -0.48
TPM1-215ENST00000558868 CRHP06850 196 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 SLC2A1P11166 492 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 RAB3AP20336 220 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 BDKRB2P30411 391 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 PITPNBP48739 271 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 IFITM3Q01628 133 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 PLP2Q04941 152 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 SCN1BQ07699 218 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 RSPO1Q2MKA7 263 aaPredicted RBP12.05□□□□□ -0.48
TPM1-215ENST00000558868 PABPC1L2AQ5JQF8 200 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 STEAP3Q658P3 488 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 PYHIN1Q6K0P9 492 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 CDH26Q8IXH8 852 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 PLPP7Q8NBV4 271 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 OR1M1Q8NGA1 313 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 OR6M1Q8NGM8 313 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 OR1J2Q8NGS2 313 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 OR6K3Q8NGY3 331 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 AKR7LQ8NHP1 331 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 LGALS14Q8TCE9 139 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 C15orf40Q8WUR7 153 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 ITFG2Q969R8 447 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 SDHCQ99643 169 aaPredicted RBP12.05□□□□□ -0.48
TPM1-215ENST00000558868 RGCCQ9H4X1 137 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 PLEKHA1Q9HB21 404 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 TMEM138Q9NPI0 162 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 TP53TG5Q9Y2B4 290 aa12.05□□□□□ -0.48
TPM1-215ENST00000558868 TENM4Q6N022 2769 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 FIGNL2A6NMB9 653 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 DHRS7CA6NNS2 312 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 K7EM74 188 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 AZGP1P25311 298 aaKnown RBP12.04□□□□□ -0.48
TPM1-215ENST00000558868 THBS4P35443 961 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 ART1P52961 327 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 TRIQKQ629K1 86 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 ZNF585AQ6P3V2 769 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 Q6ZNX1 250 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 DCDC5Q6ZRR9 648 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 Q6ZSR3 168 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 CENPSQ8N2Z9 138 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 POC5Q8NA72 575 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 OR4M1Q8NGD0 313 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 OR1K1Q8NGR3 316 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 OR5H6Q8NGV6 325 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 SNRNP27Q8WVK2 155 aaKnown RBP12.04□□□□□ -0.48
TPM1-215ENST00000558868 S100A16Q96FQ6 103 aaKnown RBP12.04□□□□□ -0.48
TPM1-215ENST00000558868 FAM71F1Q96KD3 344 aaPredicted RBP12.04□□□□□ -0.48
TPM1-215ENST00000558868 COX4I2Q96KJ9 171 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 SORCS2Q96PQ0 1159 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 ABCG5Q9H222 651 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 NEK6Q9HC98 313 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 OR5V1Q9UGF6 321 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 V9GYS6 101 aa12.04□□□□□ -0.48
TPM1-215ENST00000558868 NCOA6Q14686 2063 aaPredicted RBP12.04□□□□□ -0.48
TPM1-215ENST00000558868 MAGEB3O15480 346 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 DHRS3O75911 302 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 PTTG1O95997 202 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 LCATP04180 440 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 ALDOBP05062 364 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 DBHP09172 617 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 OCMP0CE72 109 aaPredicted RBP12.03□□□□□ -0.48
TPM1-215ENST00000558868 CD79AP11912 226 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 IL7P13232 177 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
TPM1-215ENST00000558868 HTR2CP28335 458 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 OXA1LQ15070 435 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 C1orf100Q5SVJ3 147 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 C9orf135Q5VTT2 229 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 HACD4Q5VWC8 232 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 ASPHD2Q6ICH7 369 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 TFAP2EQ6VUC0 442 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 SNX29P2Q8IUI4 249 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 Q8N402 240 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 C9orf106Q8NAJ2 232 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 C19orf18Q8NEA5 215 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 DNAAF1Q8NEP3 725 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 OR14K1Q8NGZ2 314 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 PP6455Q8WZ26 134 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 AKAP1Q92667 903 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM1-215ENST00000558868 BCL2L2Q92843 193 aaPredicted RBP12.03□□□□□ -0.48
TPM1-215ENST00000558868 EXTL1Q92935 676 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 ADAT3Q96EY9 351 aaPredicted RBP12.03□□□□□ -0.48
TPM1-215ENST00000558868 ZFP3Q96NJ6 502 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 UQCC2Q9BRT2 126 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
TPM1-215ENST00000558868 TUBD1Q9UJT1 453 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms