RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 KCNE1P15382 129 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 CLDN10P78369 228 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 FDX2Q6P4F2 183 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 CLEC18BQ6UXF7 455 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 HMGCLL1Q8TB92 370 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 RTN4IP1Q8WWV3 396 aaPredicted RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 EID2BQ96D98 161 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 SMIM7Q9BQ49 75 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 KIF13AQ9H1H9 1805 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 C19orf67A6NJJ6 358 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 SLC2A10O95528 541 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 FUT3P21217 361 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 OTX1P32242 354 aaPredicted RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 NAAAQ02083 359 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 RGNQ15493 299 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 Q56UQ5 140 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 BLNKQ8WV28 456 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 KLK6Q92876 244 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 MBNL3Q9NUK0 354 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 TRAPPC2LH3BP13 241 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 IKZF1Q13422 519 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 AADACL3Q5VUY0 350 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 APCDD1LQ8NCL9 501 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 TMEM169Q96HH4 297 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 GMPPAQ96IJ6 420 aaPredicted RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 ZBP1Q9H171 429 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 PPP1R3EQ9H7J1 279 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 DLG5Q8TDM6 1919 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 SPATA31A1Q5TZJ5 1347 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 A0A1B0GTL3 188 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 GAGE12BA1L429 117 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 C11orf98E9PRG8 122 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 DVL2O14641 736 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 CATP04040 527 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 ESDP10768 282 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 CD33P20138 364 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 TACR2P21452 398 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 ACVRL1P37023 503 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 H2BFSP57053 126 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 TCTN1Q2MV58 587 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 DLK2Q6UY11 383 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 PGBD5Q8N414 524 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 CHST13Q8NET6 341 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 ZNF296Q8WUU4 475 aaPredicted RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 GHSRQ92847 366 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 MYADMQ96S97 322 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 PDCD1LG2Q9BQ51 273 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 ZNF780BQ9Y6R6 833 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 KCNQ2O43526 872 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 AMBPP02760 352 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 TACR1P25103 407 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 FRKP42685 505 aaPredicted RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 CDKN2AP42771 156 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 MMP15P51511 669 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 EFNA3P52797 238 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 AWAT2Q6E213 333 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 NPWQ8N729 165 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 V9GY05 133 aa8.16□□□□□ -1.1
GTF2A1-203ENST00000553612 A0A1W2PR80 420 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 H0Y980 276 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 RPS12P25398 132 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 HOXA9P31269 272 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 LPAR6P43657 344 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 FAM3AP98173 230 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 SRSF5Q13243 272 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 COX20Q5RI15 118 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 MED25Q71SY5 747 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 MCHR1Q99705 422 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 GPR62Q9BZJ7 368 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 TMED3Q9Y3Q3 217 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 SPAG17Q6Q759 2223 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 FITM1A5D6W6 292 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 MELTFP08582 738 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 SRP14P37108 136 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 PAX2Q02962 417 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 RPEL1Q2QD12 228 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 DMRTC1Q5HYR2 192 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 PRR31Q5SQ13 230 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 ZNF776Q68DI1 518 aaPredicted RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 LSRQ86X29 649 aaPredicted RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 SLC35F5Q8WV83 523 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 DERL3Q96Q80 235 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 CACFD1Q9UGQ2 172 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 TRAV27A0A087WT01 109 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 RPL12P30050 165 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 HLA-DRB3P79483 266 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 LYRM7Q5U5X0 104 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 ASTLQ6HA08 431 aaPredicted RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 WDFY1Q8IWB7 410 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 TEX26Q8N6G2 289 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 FUBP1Q96AE4 644 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 TMEM19Q96HH6 336 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 SCGB3A2Q96PL1 93 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 CHST6Q9GZX3 395 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 PARLQ9H300 379 aa8.15□□□□□ -1.1
GTF2A1-203ENST00000553612 P2RX2Q9UBL9 471 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms