RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
HNRNPC-205ENST00000553300 PRR23D1E9PI22 279 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 TMEM178BH3BS89 294 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 SBK2P0C263 348 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 PRR23D2P0DMB1 279 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 GSTT1P30711 240 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 MDH2P40926 338 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 GATA4P43694 442 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 RAD23AP54725 363 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 NAA40Q86UY6 237 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 BHLHE23Q8NDY6 225 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 OR10AD1Q8NGE0 317 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 SIGLEC11Q96RL6 698 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 REPIN1Q9BWE0 567 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 PATZ1Q9HBE1 687 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 G6PC2Q9NQR9 355 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
HNRNPC-205ENST00000553300 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 MLNRO43193 412 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 PRODHO43272 600 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 XRCC2O43543 280 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 GMDSO60547 372 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 CLUP10909 449 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 DDOSTP39656 456 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 CD200P41217 278 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 MMP16P51512 607 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 CDK5Q00535 292 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 MZT1Q08AG7 82 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 EIF2B1Q14232 305 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 DCAF12L2Q5VW00 463 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 LYPD4Q6UWN0 246 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 KLBQ86Z14 1044 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 ERI1Q8IV48 349 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 SPERTQ8NA61 448 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 OTULINQ96BN8 352 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 PLEKHA8Q96JA3 519 aa11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 POLR3KQ9Y2Y1 108 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-205ENST00000553300 A0A0A6YYJ9 748 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 GGT3PA6NGU5 568 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 FAM183AA6NL82 134 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 F5H5P2 479 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 TCF21O43680 179 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 IRF2P14316 349 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 PRKACGP22612 351 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 HSD11B1P28845 292 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 PRKXP51817 358 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 ZNF92Q03936 586 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 ZMYND11Q15326 602 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 SLC35D3Q5M8T2 416 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 PLBD1Q6P4A8 553 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 PARP8Q8N3A8 854 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 OR52H1Q8NGJ2 320 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 OR6N2Q8NGY6 317 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 Q8TCH9 128 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 RNF133Q8WVZ7 376 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 SPSB4Q96A44 273 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 ABHD6Q9BV23 337 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 OR51V1Q9H2C8 321 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 MED20Q9H944 212 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 NTN4Q9HB63 628 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 DCAF16Q9NXF7 216 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 KIF17Q9P2E2 1029 aa11.07□□□□□ -0.64
HNRNPC-205ENST00000553300 H0YL77 283 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 HLA-DPB1P04440 258 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 PSKH1P11801 424 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 OR8G1Q15617 311 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 SNCBQ16143 134 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 GLYATL3Q5SZD4 288 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 MOGAT3Q86VF5 341 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 CPOQ8IVL8 374 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 TIGD4Q8IY51 512 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 HS3ST5Q8IZT8 346 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 OR11L1Q8NGX0 322 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 OR5K1Q8NHB7 308 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 ZNF420Q8TAQ5 688 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 NANPQ8TBE9 248 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 UTP4Q969X6 686 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 PRRG3Q9BZD7 231 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 METTL17Q9H7H0 456 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 SLC25A19Q9HC21 320 aa11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 PAPOLBQ9NRJ5 636 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-205ENST00000553300 DOCK11Q5JSL3 2073 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 A8MXK9 166 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 PTBP3O95758 552 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 ANXA2P07355 339 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 LYNP07948 512 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 FCGR1AP12314 374 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 CA6P23280 308 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 OPRL1P41146 370 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 CX3CR1P49238 355 aa11.05□□□□□ -0.64
HNRNPC-205ENST00000553300 CRISP1P54107 249 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms