RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 AUP1Q9Y679 476 aa13.58□□□□□ -0.24
DDX55-212ENST00000544738 TCRBV5S2A0A599 114 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 CEACAM18A8MTB9 384 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 TRAPPC2LH3BP13 241 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 WNT2P09544 360 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 IRF2P14316 349 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 ZNF12P17014 697 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 MDKP21741 143 aaPredicted RBP13.57□□□□□ -0.24
DDX55-212ENST00000544738 CALB2P22676 271 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 FMO3P31513 532 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
DDX55-212ENST00000544738 BLVRAP53004 296 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 ZNF154Q13106 437 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
DDX55-212ENST00000544738 GK3PQ14409 553 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 MICAQ29983 383 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 DRAM2Q6UX65 266 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 AQP11Q8NBQ7 271 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 SLC37A3Q8NCC5 494 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 DEFB108BQ8NET1 73 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 OR2T33Q8NG76 320 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 SPRYD4Q8WW59 207 aaPredicted RBP13.57□□□□□ -0.24
DDX55-212ENST00000544738 PLEKHA8Q96JA3 519 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 TSSK6Q9BXA6 273 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 DGCR6LQ9BY27 220 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 TMEM165Q9HC07 324 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 MMP26Q9NRE1 261 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 SAMHD1Q9Y3Z3 626 aaKnown RBP13.57□□□□□ -0.24
DDX55-212ENST00000544738 INSIG2Q9Y5U4 225 aa13.57□□□□□ -0.24
DDX55-212ENST00000544738 ARHGAP32A7KAX9 2087 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 TVP23AA6NH52 213 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 GMDSO60547 372 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 FAM107AO95990 144 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 CYB5R3P00387 301 aaPredicted RBP13.56□□□□□ -0.24
DDX55-212ENST00000544738 HLA-DPB1P04440 258 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 RBMXP38159 391 aaKnown RBP13.56□□□□□ -0.24
DDX55-212ENST00000544738 RAD23AP54725 363 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 SEC61A1P61619 476 aaKnown RBP13.56□□□□□ -0.24
DDX55-212ENST00000544738 DOK3Q7L591 496 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 OR8D4Q8NGM9 314 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 OR10S1Q8NGN2 331 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 OR11L1Q8NGX0 322 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 SSBP3Q9BWW4 388 aaPredicted RBP13.56□□□□□ -0.24
DDX55-212ENST00000544738 PDP1Q9P0J1 537 aaPredicted RBP13.56□□□□□ -0.24
DDX55-212ENST00000544738 NUP50Q9UKX7 468 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 PRPF19Q9UMS4 504 aaKnown RBP13.56□□□□□ -0.24
DDX55-212ENST00000544738 COMMD3-BMI1R4GMX3 469 aa13.56□□□□□ -0.24
DDX55-212ENST00000544738 IFNGP01579 166 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 RPS2P15880 293 aaKnown RBP13.55□□□□□ -0.24
DDX55-212ENST00000544738 OMGP23515 440 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 CD200P41217 278 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 RPS27P42677 84 aaKnown RBP13.55□□□□□ -0.24
DDX55-212ENST00000544738 ENTPD1P49961 510 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 SLC25A1P53007 311 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 PPP1R8Q12972 351 aaKnown RBP13.55□□□□□ -0.24
DDX55-212ENST00000544738 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 TAF13Q15543 124 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 PCK2Q16822 640 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 FBLN7Q53RD9 439 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 NLRC3Q7RTR2 1065 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 DCXRQ7Z4W1 244 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 KLBQ86Z14 1044 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 CCDC197Q8NCU1 140 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 OR51L1Q8NGJ5 315 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 Q8TCH9 128 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 SLC25A28Q96A46 364 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 ASB9Q96DX5 294 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 NEIL1Q96FI4 390 aaPredicted RBP13.55□□□□□ -0.24
DDX55-212ENST00000544738 LRGUKQ96M69 825 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
DDX55-212ENST00000544738 TMEM246Q9BRR3 403 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 COPS4Q9BT78 406 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 NMNAT2Q9BZQ4 307 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 OPA3Q9H6K4 179 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 ZMAT3Q9HA38 289 aaKnown RBP13.55□□□□□ -0.24
DDX55-212ENST00000544738 U3KQV3 271 aa13.55□□□□□ -0.24
DDX55-212ENST00000544738 IGHV3-64DA0A0J9YX35 117 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 GGT3PA6NGU5 568 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 RIIAD1A6NNX1 92 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 CD300LBA8K4G0 201 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
DDX55-212ENST00000544738 ZNF205O95201 554 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 SPARCP09486 303 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 PPIAL4GP0DN37 164 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 RAP2AP10114 183 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
DDX55-212ENST00000544738 SPI1P17947 270 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 SLC15A1P46059 708 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 GNB2P62879 340 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 MS4A2Q01362 244 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 CRMP1Q14194 572 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 OR8G1Q15617 311 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 ZNF404Q494X3 552 aa13.54□□□□□ -0.24
DDX55-212ENST00000544738 BTNL3Q6UXE8 466 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms