RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 SPACA5Q96QH8 159 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 OR2M4Q96R27 311 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 ABHD6Q9BV23 337 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 SDHAF3Q9NRP4 125 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 DCAF16Q9NXF7 216 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 A0A1W2PQU0 124 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 MED19A0JLT2 244 aaPredicted RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 HSPB2A8KAH6 182 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 NPIPB9F8W1W9 429 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 CYR61O00622 381 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 OR2C1O95371 312 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 FCGR3AP08637 254 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 RPL12P30050 165 aaKnown RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 FCGR2CP31995 323 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 SULT1A2P50226 295 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 DMWDQ09019 674 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 HSPB2Q16082 182 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 OR1J1Q8NGS3 322 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 MRGPRFQ96AM1 343 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 C2orf50Q96LR7 162 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 RAB18Q9NP72 206 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 TIMM10BQ9Y5J6 103 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 SDCBPO00560 298 aaPredicted RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 TAAR5O14804 337 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 DRD3P35462 400 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 RBMXP38159 391 aaKnown RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 ZNF141Q15928 474 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 OR2A2Q6IF42 318 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 CA13Q8N1Q1 262 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 BCORP1Q8N888 145 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 AQP3Q92482 292 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 AQP10Q96PS8 301 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 ST6GALNAC5Q9BVH7 336 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 PARP11Q9NR21 331 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 FAM212BQ9NTI7 297 aaPredicted RBP11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 FBXL17Q9UF56 701 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 EML5Q05BV3 1969 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 CHD7Q9P2D1 2997 aa11.49□□□□□ -0.57
SFSWAP-209ENST00000540469 TRBV6-7A0A0A0MS04 114 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 SFT2D2O95562 160 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 CST4P01036 141 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 ACRP10323 421 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 EMC4Q5J8M3 183 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 CLEC9AQ6UXN8 241 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 ZNF440Q8IYI8 595 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 SEMA6DQ8NFY4 1073 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 ZDHHC12Q96GR4 267 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 RBM14Q96PK6 669 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 SCGB3A2Q96PL1 93 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 CNTNAP3Q9BZ76 1288 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 PRO1933Q9H354 126 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 UNKLQ9H9P5 680 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 KIR2DS3Q14952 304 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 CNKSR3Q6P9H4 555 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 NPSR1Q6W5P4 371 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 NKAIN3Q8N8D7 197 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 CCL4L1Q8NHW4 92 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 ANKRD9Q96BM1 317 aaPredicted RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 MRPL38Q96DV4 380 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 EGLN1Q9GZT9 426 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 PILRAQ9UKJ1 303 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 OR52A1Q9UKL2 312 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 SOX1O00570 391 aaPredicted RBP11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 HCRTR2O43614 444 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 LILRB3O75022 631 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 JTBO76095 146 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 SMIM10L1P0DMW3 83 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 AGBL4Q5VU57 503 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 BTNL8Q6UX41 500 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 OR10D4PQ8NGN7 298 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 OR2I1PQ8NGU4 316 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 TAAR8Q969N4 342 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 SMIM10Q96HG1 83 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 GPER1Q99527 375 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
SFSWAP-209ENST00000540469 OTOL1A6NHN0 477 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 MPZL1O95297 269 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 PAX6P26367 422 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 CD226Q15762 336 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 USF2Q15853 346 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 ACKR1Q16570 336 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 UNQ6494/PRO21346Q6UXR6 183 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 OOSP2Q86WS3 158 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 ANGPTL5Q86XS5 388 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 TMEM104Q8NE00 496 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 OR52N4Q8NGI2 321 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 TSACCQ96A04 125 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 APOOQ9BUR5 198 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 SUCNR1Q9BXA5 334 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 OPA3Q9H6K4 179 aa11.47□□□□□ -0.57
SFSWAP-209ENST00000540469 POMT1Q9Y6A1 747 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms