RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 DHDDSQ86SQ9 333 aa10.27□□□□□ -0.77
DDX41-215ENST00000512431 SLC7A13Q8TCU3 470 aa10.27□□□□□ -0.77
DDX41-215ENST00000512431 ZNF570Q96NI8 536 aa10.27□□□□□ -0.77
DDX41-215ENST00000512431 RPS6KA6Q9UK32 745 aa10.27□□□□□ -0.77
DDX41-215ENST00000512431 COA3Q9Y2R0 106 aaPredicted RBP10.27□□□□□ -0.77
DDX41-215ENST00000512431 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.26□□□□□ -0.77
DDX41-215ENST00000512431 EFCAB9A8MZ26 197 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 NDUFB3O43676 98 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 LCATP04180 440 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 TNFRSF1BP20333 461 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 GRK5P34947 590 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 SLC9A3P48764 834 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
DDX41-215ENST00000512431 PRB3Q04118 309 aaPredicted RBP10.26□□□□□ -0.77
DDX41-215ENST00000512431 KLRD1Q13241 179 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 BLMHQ13867 455 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 TEX36Q5VZQ5 186 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 PGM2L1Q6PCE3 622 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 LIAT1Q6ZQX7 453 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 COLCA1Q6ZS62 124 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 CCDC80Q76M96 950 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 ACOT11Q8WXI4 607 aaPredicted RBP10.26□□□□□ -0.77
DDX41-215ENST00000512431 Q96M85 177 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 CCL13Q99616 98 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 CGREF1Q99674 301 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 NKX3-1Q99801 234 aaPredicted RBP10.26□□□□□ -0.77
DDX41-215ENST00000512431 C14orf119Q9NWQ9 140 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 ADAM18Q9Y3Q7 739 aa10.26□□□□□ -0.77
DDX41-215ENST00000512431 COL7A1Q02388 2944 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 IGHV3OR15-7A0A075B7D8 119 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 E9PQ18 207 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 F5H5K5 113 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 FCN3O75636 299 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 PPP1R3DO95685 299 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 PTBP3O95758 552 aaKnown RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 IFNA14P01570 189 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 CD14P08571 375 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 MUC1P15941 1255 aaPredicted RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 ZNF26P17031 533 aaPredicted RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 GGT2P36268 569 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 OR1E2P47887 323 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 VSNL1P62760 191 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 SELPLGQ14242 412 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 KCNMB1Q16558 191 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 VMACQ2NL98 169 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 LRRC75BQ2VPJ9 315 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 LRRC10Q5BKY1 277 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 MESTQ5EB52 335 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 ZNF826PQ6ZT77 177 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 PNKDQ8N490 385 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 GCSAMQ8N6F7 178 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 Q8N7P7 452 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 WFDC9Q8NEX5 89 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 OR10A6Q8NH74 314 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 LZICQ8WZA0 190 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 H1FXQ92522 213 aaKnown RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 SYT4Q9H2B2 425 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 RABEP2Q9H5N1 569 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 KAT8Q9H7Z6 458 aaKnown RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 PRPF19Q9UMS4 504 aaKnown RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 NDUFAF1Q9Y375 327 aa10.25□□□□□ -0.77
DDX41-215ENST00000512431 SF3B6Q9Y3B4 125 aaKnown RBP10.25□□□□□ -0.77
DDX41-215ENST00000512431 GGT3PA6NGU5 568 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 CD300LBA8K4G0 201 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 ACSM4P0C7M7 580 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 PF4V1P10720 104 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
DDX41-215ENST00000512431 DLX1P56177 255 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 HIST1H3AP68431 136 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 SLC35A2P78381 396 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 PRKCDQ05655 676 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 DCTN2Q13561 401 aaKnown RBP10.24□□□□□ -0.77
DDX41-215ENST00000512431 AANATQ16613 207 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 HIST2H3PS2Q5TEC6 136 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 DNM1P34Q6PK57 102 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 HIST2H3AQ71DI3 136 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 NRMQ8IXM6 262 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 FGFRL1Q8N441 504 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 PAPD5Q8NDF8 572 aaKnown RBP10.24□□□□□ -0.77
DDX41-215ENST00000512431 OR13C2Q8NGS9 318 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 PITX2Q99697 317 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
DDX41-215ENST00000512431 DCTN5Q9BTE1 182 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 CCDC28BQ9BUN5 200 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 METTL8Q9H825 291 aaKnown RBP10.24□□□□□ -0.77
DDX41-215ENST00000512431 NMNAT1Q9HAN9 279 aaPredicted RBP10.24□□□□□ -0.77
DDX41-215ENST00000512431 TENM3Q9P273 2699 aa10.24□□□□□ -0.77
DDX41-215ENST00000512431 A0A1W2PQ09 198 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 WI2-2373I1.2A0A1W2PRP0 233 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 TMEM120BA0PK00 339 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 M0R1W7 72 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 ANGPT2O15123 496 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 DUS4LO95620 317 aaKnown RBP10.23□□□□□ -0.77
DDX41-215ENST00000512431 LHBP01229 141 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 PAICSP22234 425 aaKnown RBP10.23□□□□□ -0.77
DDX41-215ENST00000512431 GSK3BP49841 420 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 CRYBA2P53672 197 aa10.23□□□□□ -0.77
DDX41-215ENST00000512431 TPTEP56180 551 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms