RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 GGT3PA6NGU5 568 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 POM121CA8CG34 1229 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 H0YL77 283 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 BHLHE40O14503 412 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 XRCC2O43543 280 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 ENSAO43768 121 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 CCNB2O95067 398 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 RNASE1P07998 156 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 CD80P33681 288 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 SEC61A1P61619 476 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 TAF13Q15543 124 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 TEX30Q5JUR7 227 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 SLC35F1Q5T1Q4 408 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 OTPQ5XKR4 325 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 PARP8Q8N3A8 854 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 LNX2Q8N448 690 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 OR2T33Q8NG76 320 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 C22orf15Q8WYQ4 148 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF747Q9BV97 191 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 TOR3AQ9H497 397 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 PNRC2Q9NPJ4 139 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 TBC1D23Q9NUY8 699 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 C14orf119Q9NWQ9 140 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 ERVK-18Q9QC07 812 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 RNF7Q9UBF6 113 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF69Q9UC07 566 aa11.38□□□□□ -0.59
CCHCR1-227ENST00000508852 TRAV38-1A0A0B4J264 116 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 CD300LBA8K4G0 201 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 PTBP3O95758 552 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 CFL1P23528 166 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 OTX1P32242 354 aaPredicted RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 GRK5P34947 590 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 MAGEA2P43356 314 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 ENTPD1P49961 510 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 SLC25A1P53007 311 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 GRB2P62993 217 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 IL13RA1P78552 427 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 PAX2Q02962 417 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 MAB21L1Q13394 359 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 PCK2Q16822 640 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 FAM98BQ52LJ0 330 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 KLF17Q5JT82 389 aaPredicted RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 CLEC12AQ5QGZ9 265 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 RHOUQ7L0Q8 258 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 PIGWQ7Z7B1 504 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 MAP6Q96JE9 813 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 KCNJ15Q99712 375 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 NUDT16L1Q9BRJ7 211 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 COPS4Q9BT78 406 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 WDR76Q9H967 626 aa11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 MRPL22Q9NWU5 206 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-227ENST00000508852 DNAJC9-AS1A6NH13 148 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF878C9JN71 531 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 PLATP00750 562 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 HLA-DPB1P04440 258 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF3P17036 446 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 GPR157Q5UAW9 335 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 WDR25Q64LD2 544 aaPredicted RBP11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 DCXRQ7Z4W1 244 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 FTMTQ8N4E7 242 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 PNLDC1Q8NA58 520 aaKnown RBP11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 DDOQ99489 341 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 ADAT1Q9BUB4 502 aaKnown RBP11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 DGCR6LQ9BY27 220 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 FN3KQ9H479 309 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 EGLN3Q9H6Z9 239 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 REEP1Q9H902 201 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 NOX4Q9NPH5 578 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 ARL8BQ9NVJ2 186 aa11.36□□□□□ -0.59
CCHCR1-227ENST00000508852 A0A1B0GUS0 222 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 RIIAD1A6NNX1 92 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 ANKRD30BLA7E2S9 258 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 LGALS8O00214 317 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 P2RY10O00398 339 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 FAM20BO75063 409 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 TIPRLO75663 272 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 ECDO95905 644 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 GASTP01350 101 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 CA6P23280 308 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 PYCR1P32322 319 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 MSX2P35548 267 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 PSMB10P40306 273 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 PMELP40967 661 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 GNGT1P63211 74 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF92Q03936 586 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 MICAQ29983 383 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF770Q6IQ21 691 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 DHFR2Q86XF0 187 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 AQP11Q8NBQ7 271 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 SLC37A3Q8NCC5 494 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 OR52H1Q8NGJ2 320 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 DACT3Q96B18 629 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 SLAMF6Q96DU3 332 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 DMRTB1Q96MA1 342 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 BTBD10Q9BSF8 475 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 TSSK6Q9BXA6 273 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF696Q9H7X3 374 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 COMMD3-BMI1R4GMX3 469 aa11.35□□□□□ -0.59
CCHCR1-227ENST00000508852 ZNF593O00488 134 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms