RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 SPACA6W5XKT8 324 aa6.51□□□□□ -1.37
LIMCH1-207ENST00000508466 KIF26BQ2KJY2 2108 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 LOC101059948A0A1B0GTJ6 334 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 C17orf51A8MQB3 221 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 C9J4A7 227 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 NDUFS4O43181 175 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 AMBPP02760 352 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 DBIP07108 87 aaKnown RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 OR2T7P0C7T2 308 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 MPC1LP0DKB6 136 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 PRPS1P60891 318 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 RPS4XP62701 263 aaKnown RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM35AQ53FP2 167 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC35D3Q5M8T2 416 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 Q5PR19 223 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 CLEC18BQ6UXF7 455 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 COX15Q7KZN9 410 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 TMCO2Q7Z6W1 182 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC35G3Q8N808 338 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 OR2T27Q8NH04 317 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 MUCL1Q96DR8 90 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 C5orf34Q96MH7 638 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 TAAR9Q96RI9 348 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 ALG12Q9BV10 488 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 OR51B6Q9H340 312 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 PDE7BQ9NP56 450 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 PRSS16Q9NQE7 514 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 AURKAIP1Q9NWT8 199 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 CYP8B1Q9UNU6 501 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 ICKQ9UPZ9 632 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 INSL5Q9Y5Q6 135 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 PRRC2CQ9Y520 2896 aaKnown RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 FREM3P0C091 2139 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 MAP1BP46821 2468 aaKnown RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 TOX3O15405 576 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 NSA2O95478 260 aaKnown RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 PNPP00491 289 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 AK1P00568 194 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 IGFALSP35858 605 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 EIF1AXP47813 144 aaKnown RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 FLT3LGP49771 235 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 CCR4P51679 360 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 ELLP55199 621 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 AP1S1P61966 158 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 HNRNPKP61978 463 aaKnown RBP eCLIP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 BTN3A2P78410 334 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 PMS2P11Q13670 270 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 HERPUD1Q15011 391 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 RSPO4Q2I0M5 234 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 TSPO2Q5TGU0 170 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 CST9LP1Q5W188 147 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 ASTLQ6HA08 431 aaPredicted RBP6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 CYB561D1Q8N8Q1 229 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 OR1L6Q8NGR2 347 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 ARHGDIGQ99819 225 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 NICN1Q9BSH3 213 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC5A7Q9GZV3 580 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 BANF2Q9H503 90 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 WFDC1Q9HC57 220 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 MED17Q9NVC6 651 aa6.5□□□□□ -1.37
LIMCH1-207ENST00000508466 B4E171 279 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 C11orf98E9PRG8 122 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 NRG2O14511 850 aaPredicted RBP6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 RPL12P30050 165 aaKnown RBP6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 PPICP45877 212 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TDGF1P3P51864 188 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 MRPS11P82912 194 aaKnown RBP6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 PAX5Q02548 391 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TMEM268Q5VZI3 342 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ASPHD2Q6ICH7 369 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 UNQ9370/PRO34162Q6UXP9 181 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SUMF1Q8NBK3 374 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 GALNT14Q96FL9 552 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC17A5Q9NRA2 495 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TUBG2Q9NRH3 451 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 RXFP3Q9NSD7 469 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 TAS2R8Q9NYW2 309 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 FOXJ2Q9P0K8 574 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC25A13Q9UJS0 675 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC5A6Q9Y289 635 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 MYO16Q9Y6X6 1858 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 PLXNB3Q9ULL4 1909 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 A0A1B0GWA3 101 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 M0R143 59 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SRPX2O60687 465 aaPredicted RBP6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 MPZL1O95297 269 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 OR5H8P0DN80 308 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 CALCBP10092 127 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 HOXA6P31267 233 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ALDH3B1P43353 468 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 EMDP50402 254 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ERVS71-1P61550 626 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 IAH1Q2TAA2 248 aaPredicted RBP6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 AARDQ4LEZ3 155 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ALG10BQ5I7T1 473 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 CLLU1OSQ5K130 101 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ULK3Q6PHR2 472 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 SLC25A42Q86VD7 318 aa6.49□□□□□ -1.37
LIMCH1-207ENST00000508466 ACOT4Q8N9L9 421 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms