RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GTF2H4Q92759 462 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 DCPSQ96C86 337 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ZNF396Q96N95 335 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 MED10Q9BTT4 135 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OSBPL11Q9BXB4 747 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 YTHDF1Q9BYJ9 559 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 PORCNQ9H237 461 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 C6orf50Q9HD87 102 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 MYOZ1Q9NP98 299 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ISYNA1Q9NPH2 558 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR2S2Q9NQN1 319 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 NECAP2Q9NVZ3 263 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 RMND1Q9NWS8 449 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 SDHAF2Q9NX18 166 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 MTFP1Q9UDX5 166 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 MRM2Q9UI43 246 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TRAPPC4Q9Y296 219 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 NOTCH2Q04721 2471 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TRAV8-7A0A075B6U6 113 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 IGHV3OR16-9A0A0B4J2B5 98 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TVP23AA6NH52 213 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 F8VP50 259 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 PHOX2AO14813 284 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 EMC8O43402 210 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 UPK1BO75841 260 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 LDOC1O95751 146 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TTC4O95801 387 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OMGP23515 440 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ZBTB25P24278 435 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 LOXP28300 417 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 CRATP43155 626 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 CAV2P51636 162 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ZNF138P52744 262 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TSPAN5P62079 268 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 IFFO1Q0D2I5 559 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 GINS1Q14691 196 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 HERPUD1Q15011 391 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR2T5Q6IEZ7 315 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TRMT10CQ7L0Y3 403 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 CDKL3Q8IVW4 592 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 PRSS58Q8IYP2 241 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 FAM9CQ8IZT9 166 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 CA13Q8N1Q1 262 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 STPG2Q8N412 459 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 FAM71E2Q8N5Q1 922 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 SUMF2Q8NBJ7 301 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR11H7Q8NGC8 314 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR10AD1Q8NGE0 317 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR2T29Q8NH02 315 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TMEM234Q8WY98 164 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 LRRC45Q96CN5 670 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 LRRC58Q96CX6 371 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 SLC35E1Q96K37 410 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ARL5BQ96KC2 179 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR2M2Q96R28 347 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 CHRNA10Q9GZZ6 450 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 C1orf198Q9H425 327 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 WDR55Q9H6Y2 383 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 RGS18Q9NS28 235 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TNFRSF19Q9NS68 423 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 TREX1Q9NSU2 369 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 NRBP2Q9NSY0 501 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 DEC1Q9P2X7 70 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ENPP5Q9UJA9 477 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 NXT1Q9UKK6 140 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 CACNA1FO60840 1977 aa2.76□□□□□ -1.97
TRAPPC13-208ENST00000505553 ARHGAP23Q9P227 1491 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 HCFC1P51610 2035 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 A0A1B0GVY2 172 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 HDAC3O15379 428 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 CALUO43852 315 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 SUPT3HO75486 399 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 INSP01308 110 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 IGHV4-34P06331 123 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 CD3GP09693 182 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR5AL1P0C617 328 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 FUT3P21217 361 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 HTR1DP28221 377 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 GNRHRP30968 328 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 MYCNOSP40205 109 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 NMUP48645 174 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 PRLHRP49683 370 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 TAF6P49848 677 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 C2orf80Q0P641 193 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 TMEM183BQ1AE95 376 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 TMEM255AQ5JRV8 349 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 HES5Q5TA89 166 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 METTL21CQ5VZV1 264 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 ARL9Q6T311 187 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 Q6ZR54 194 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 C6orf120Q7Z4R8 191 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 P2RY8Q86VZ1 359 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 SLC30A8Q8IWU4 369 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 TMEM183AQ8IXX5 376 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 SELENOHQ8IZQ5 122 aaKnown RBP2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 METTL13Q8N6R0 699 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 DCAF4L2Q8NA75 395 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 MDS2Q8NDY4 140 aa2.75□□□□□ -1.97
TRAPPC13-208ENST00000505553 OR7G1Q8NGA0 311 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms