RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 NABP1Q96AH0 204 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF775Q96BV0 537 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-214ENST00000495485 CPNE2Q96FN4 548 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-214ENST00000495485 WDYHV1Q96HA8 205 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 GMPPAQ96IJ6 420 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-214ENST00000495485 SORCS2Q96PQ0 1159 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 RNF121Q9H920 327 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 CALHM2Q9HA72 323 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 PLEKHA1Q9HB21 404 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 DIABLOQ9NR28 239 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 SLC17A5Q9NRA2 495 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF275Q9NSD4 429 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-214ENST00000495485 LUZP4Q9P127 313 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 FBXL3Q9UKT7 428 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 BAHCC1Q9P281 2608 aa9.01□□□□□ -0.97
HDAC3-214ENST00000495485 ALPK2Q86TB3 2170 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 CACNA1CQ13936 2221 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 DOPEY2Q9Y3R5 2298 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 FIGNL2A6NMB9 653 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 M0R135 149 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 P2RY10O00398 339 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 SLC17A2O00624 439 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 DVL2O14641 736 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 DOK2O60496 412 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 SCGNO76038 276 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 UBL3O95164 117 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 TTRP02766 147 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ACSM4P0C7M7 580 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 IL7P13232 177 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 PLA2G2AP14555 144 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 SNRPBP14678 240 aaKnown RBP9□□□□□ -0.97
HDAC3-214ENST00000495485 ATF1P18846 271 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 RAB3AP20336 220 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 BDKRB2P30411 391 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 THBS2P35442 1172 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ARR3P36575 388 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF121P58317 390 aaPredicted RBP9□□□□□ -0.97
HDAC3-214ENST00000495485 TGFBR3Q03167 851 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 PLP2Q04941 152 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 HES5Q5TA89 166 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 OR2A2Q6IF42 318 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 TMEM53Q6P2H8 277 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
HDAC3-214ENST00000495485 NR2C2APQ86WQ0 139 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 CCDC36Q8IYA8 594 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 OR6M1Q8NGM8 313 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 OR10S1Q8NGN2 331 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 FNDC9Q8TBE3 224 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF799Q96GE5 643 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 SOSTQ9BQB4 213 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 PRDM14Q9GZV8 571 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 SLC22A4Q9H015 551 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ABCG5Q9H222 651 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 RGCCQ9H4X1 137 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 PPP1R3EQ9H7J1 279 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 LIN7BQ9HAP6 207 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 TMEM138Q9NPI0 162 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 FAIMQ9NVQ4 179 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 SLC5A6Q9Y289 635 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF835Q9Y2P0 537 aa9□□□□□ -0.97
HDAC3-214ENST00000495485 CENPEQ02224 2701 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 DHRS7CA6NNS2 312 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 F5H5K5 113 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 CTDSPLO15194 276 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 WDR1O75083 606 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 CNOT4O95628 575 aaKnown RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 GSTT2BP0CG30 244 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 COX5BP10606 129 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 ABOP16442 354 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 IGFBP3P17936 291 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 CCL1P22362 96 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 AZGP1P25311 298 aaKnown RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 HTR2CP28335 458 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 DDOSTP39656 456 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 MMP15P51511 669 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 AP3S2P59780 193 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 PMP22Q01453 160 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 ASAH1Q13510 395 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF79Q15937 498 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 EIF2S3LQ2VIR3 472 aaKnown RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 CCDC92Q53HC0 331 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 TSPO2Q5TGU0 170 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 OTPQ5XKR4 325 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 FAM57BQ71RH2 274 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 ZNF627Q7L945 461 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 OR51A4Q8NGJ6 313 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 OR1F12Q8NHA8 337 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 OR51E1Q8TCB6 317 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 PP6455Q8WZ26 134 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 PTX4Q96A99 478 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 RFT1Q96AA3 541 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 FGGYQ96C11 551 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 ALKBH3Q96Q83 286 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 UQCC2Q9BRT2 126 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 TP63Q9H3D4 680 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 PNRC2Q9NPJ4 139 aaKnown RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 NCOA6Q14686 2063 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 ANKHD1Q8IWZ3 2542 aaKnown RBP8.99□□□□□ -0.97
HDAC3-214ENST00000495485 DOCK7Q96N67 2140 aa8.99□□□□□ -0.97
HDAC3-214ENST00000495485 FLNBO75369 2602 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms