RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SDR9C7Q8NEX9 313 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 PSMF1Q92530 271 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 FRAT1Q92837 279 aaPredicted RBP3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 SEC22AQ96IW7 307 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 MRPL45Q9BRJ2 306 aaKnown RBP3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 CHRDL1Q9BU40 450 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 SLC7A5P2Q9GIP4 190 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 GPATCH2LQ9NWQ4 482 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 TREM2Q9NZC2 230 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 SLC7A8Q9UHI5 535 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF639Q9UID6 485 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 MOKQ9UQ07 419 aa3.54□□□□□ -1.84
SSX2IP-208ENST00000490476 IGHV1OR15-1A0A075B7D0 117 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 KLF18A0A0U1RQI7 1052 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 K7EIL1 84 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 DCTN6O00399 190 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 LYPLA1O75608 230 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 PRB4P10163 310 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ATP1B2P14415 290 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 CALCRP30988 508 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 SHMT2P34897 504 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 CAPZBP47756 277 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 TFAMQ00059 246 aaKnown RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 EIF4EBP2Q13542 120 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 CUL2Q13617 745 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 OXA1LQ15070 435 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 NSUN5P1Q3KNT7 163 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 C6orf226Q5I0X4 101 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 SAMD4BQ5PRF9 694 aaKnown RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ZFAND6Q6FIF0 208 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 CLEC2AQ6UVW9 174 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ZBED8Q8IZ13 594 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 FTMTQ8N4E7 242 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 TMEM252Q8N6L7 170 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ACOT4Q8N9L9 421 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ANKRD49Q8WVL7 239 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 DNAJA4Q8WW22 397 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 UFD1Q92890 307 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF641Q96N77 438 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 PANX2Q96RD6 677 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 PLIN2Q99541 437 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF184Q99676 751 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 CCDC77Q9BR77 488 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 PYGO2Q9BRQ0 406 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 NAT9Q9BTE0 207 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ANP32EQ9BTT0 268 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 PPA2Q9H2U2 334 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF160Q9HCG1 818 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 RPUSD1Q9UJJ7 312 aaKnown RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 TRAF3IP3Q9Y228 551 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 KCNIP3Q9Y2W7 256 aa3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 RPL36Q9Y3U8 105 aaKnown RBP3.53□□□□□ -1.84
SSX2IP-208ENST00000490476 A0A0G2JRQ6 117 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 TNFSF11O14788 317 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 SERF1AO75920 110 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 PSMB1P20618 241 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ZP3P21754 424 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 USF1P22415 310 aaPredicted RBP3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 PTGDSP41222 190 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ACOT2P49753 483 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 GPM6AP51674 278 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 HNRNPA3P51991 378 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 SUCLG1P53597 346 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 KIAA0040Q15053 153 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 BCL7AQ4VC05 210 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 CARD16Q5EG05 197 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 C1orf185Q5T7R7 199 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 OR2G6Q5TZ20 316 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 C22orf39Q6P5X5 142 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 BAIAP2L2Q6UXY1 529 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF571Q7Z3V5 609 aaPredicted RBP3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 VRK2Q86Y07 508 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 CSGALNACT2Q8N6G5 542 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ZDHHC22Q8N966 263 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 SNX31Q8N9S9 440 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 MDS2Q8NDY4 140 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 OR11G2Q8NGC1 345 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 OR9A1PQ8NGU1 263 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 GPR61Q9BZJ8 451 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ACTR6Q9GZN1 396 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ZSCAN16Q9H4T2 348 aaPredicted RBP3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF702PQ9H963 129 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 FANCEQ9HB96 536 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 NMRAL1Q9HBL8 299 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 CSNK1G1Q9HCP0 422 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 KLHL28Q9NXS3 571 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 HS3ST2Q9Y278 367 aa3.52□□□□□ -1.85
SSX2IP-208ENST00000490476 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 IGKV1D-8A0A087WSZ0 117 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 IGHV7-81A0A0B4J1V7 117 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 FAM168BA1KXE4 195 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 ZNF716A6NP11 495 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 EEF1E1-BLOC1S5C9J1V9 151 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 GFYI3L273 518 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 K7ERQ8 282 aa3.51□□□□□ -1.85
SSX2IP-208ENST00000490476 HSD17B6O14756 317 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms