RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PDCD1LG2Q9BQ51 273 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ERP44Q9BS26 406 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF649Q9BS31 505 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 NUDT9Q9BW91 350 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 VCX2Q9H322 139 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 FGF20Q9NP95 211 aaPredicted RBP0.52□□□□□ -2.33
CCDC93-209ENST00000488908 TMEM106BQ9NUM4 274 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 HRASLS2Q9NWW9 162 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 CLN8Q9UBY8 286 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 HES2Q9Y543 173 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 LRRC42Q9Y546 428 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 USP47Q96K76 1375 aa0.52□□□□□ -2.33
CCDC93-209ENST00000488908 IGHV3OR16-9A0A0B4J2B5 98 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 A6NDN8 102 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 SDHAF1A6NFY7 115 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 H0YCG3 227 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 CLDN34H7C241 214 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 PLPP1O14494 284 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 MTX2O75431 263 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 IGHV1-46P01743 117 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 MAS1P04201 325 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TROVE2P10155 538 aaKnown RBP eCLIP0.51□□□□□ -2.338e-6■■■■□ 26.6
CCDC93-209ENST00000488908 ZNF43P17038 809 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 NELFEP18615 380 aaKnown RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 IL32P24001 234 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 NAA10P41227 235 aaPredicted RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TGM4P49221 684 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TMED10P49755 219 aaKnown RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 AIF1P55008 147 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TAS2R46P59540 309 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 RPL23AP62750 156 aaKnown RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 IFITM3Q01628 133 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 LIPEQ05469 1076 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ART3Q13508 389 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 DDX39BQ13838 428 aaKnown RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 NCF4Q15080 339 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 FHOD3Q2V2M9 1422 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 WDR59Q6PJI9 974 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TMPRSS11AQ6ZMR5 421 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 MBOAT1Q6ZNC8 495 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 MBOAT2Q6ZWT7 520 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 PAGE2Q7Z2X7 111 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 FAM71AQ8IYT1 594 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF645Q8N7E2 425 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 PRELID2Q8N945 189 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 OR5B3Q8NH48 314 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ACTL9Q8TC94 416 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 EEF1AKMT3Q96AZ1 226 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 BTN2A3PQ96KV6 586 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 IGF2BP2-AS1Q96M15 143 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 OR2V2Q96R30 315 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ATP5SQ99766 215 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TMEM243Q9BU79 118 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 KIAA1671Q9BY89 1806 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ANKRD60Q9BZ19 345 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ROPN1BQ9BZX4 212 aaPredicted RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 METTL7AQ9H8H3 244 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF302Q9NR11 478 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 TAS2R5Q9NYW4 299 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 SUN2Q9UH99 717 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 ISY1Q9ULR0 285 aaKnown RBP0.51□□□□□ -2.33
CCDC93-209ENST00000488908 CLEC4AQ9UMR7 237 aa0.51□□□□□ -2.33
CCDC93-209ENST00000488908 SMIM26A0A096LP01 95 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 SMKR1H3BMG3 65 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 H7C0C1 242 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 NDC80O14777 642 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 AIM2O14862 343 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 RAB29O14966 203 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 SERPINB7O75635 380 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 AQP8O94778 261 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 CPSF4O95639 269 aaKnown RBP0.5□□□□□ -2.33
CCDC93-209ENST00000488908 CD28P10747 220 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 DESP17661 470 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 TNNI1P19237 187 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 PRKACBP22694 351 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 GLRA2P23416 452 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 ATP5OP48047 213 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 TPMTP51580 245 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 ELF3P78545 371 aaPredicted RBP0.5□□□□□ -2.33
CCDC93-209ENST00000488908 SP4Q02446 784 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 KDSRQ06136 332 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 ILKQ13418 452 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 NAB1Q13506 487 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 DGCR6Q14129 220 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 SLC9A3R2Q15599 337 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 PSMD5Q16401 504 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 C1orf185Q5T7R7 199 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 FAM104BQ5XKR9 115 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 ZNF660Q6AZW8 331 aaPredicted RBP0.5□□□□□ -2.33
CCDC93-209ENST00000488908 FAM131AQ6UXB0 335 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 CD300LGQ6UXG3 332 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 ORMDL3Q8N138 153 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 LINC00469Q8N7U9 141 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 OR52M1Q8NGK5 317 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 OR51E1Q8TCB6 317 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 HAUS1Q96CS2 278 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 KCNS3Q9BQ31 491 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 INIPQ9NRY2 104 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 MTCH1Q9NZJ7 389 aa0.5□□□□□ -2.33
CCDC93-209ENST00000488908 SLC17A7Q9P2U7 560 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms