RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 C5orf63A6NC05 138 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 PNPP00491 289 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 ADRA2AP08913 450 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 PAX1P15863 534 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 OR12D2P58182 307 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 SNRPD2P62316 118 aaKnown RBP16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 ZNF92Q03936 586 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 MED21Q13503 144 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 TP53I3Q53FA7 332 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 RBM48Q5RL73 367 aaKnown RBP16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 GLYATL3Q5SZD4 288 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 AHSA2Q719I0 299 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 ZNF540Q8NDQ6 660 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 SGK3Q96BR1 496 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 MBD6Q96DN6 1003 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 SIGLEC11Q96RL6 698 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 DUSP21Q9H596 190 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 CXorf56Q9H5V9 222 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 TAAR3PQ9P1P4 343 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 MYEF2Q9P2K5 600 aaKnown RBP16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 CGGBP1Q9UFW8 167 aaPredicted RBP16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 NUFIP1Q9UHK0 495 aaKnown RBP16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 GPR160Q9UJ42 338 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 ZNF391Q9UJN7 358 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 GNG8Q9UK08 70 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 CAB39Q9Y376 341 aaPredicted RBP16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 N6AMT1Q9Y5N5 214 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 SNX5Q9Y5X3 404 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 DCHS2Q6V1P9 2916 aa16.59■□□□□ 0.25
PCOLCE-208ENST00000487172 FBN2P35556 2912 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 A0A0U1RQV5 110 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 LOC110117498-PIK3R3F6TDL0 507 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 TBX1O43435 398 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 SELEP16581 610 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 MYL12AP19105 171 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 CFL1P23528 166 aaKnown RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 LIPAP38571 399 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 PPOXP50336 477 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 SLC35A2P78381 396 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 MVKQ03426 396 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 MRPL28Q13084 256 aaKnown RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 HLXQ14774 488 aaPredicted RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 TMEM255AQ5JRV8 349 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 RNLSQ5VYX0 342 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 FDX2Q6P4F2 183 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 PGAP1Q75T13 922 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 CDH24Q86UP0 819 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 STX19Q8N4C7 294 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 OR8B12Q8NGG6 310 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 RORBQ92753 470 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 ITFG2Q969R8 447 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 PBOV1Q9GZY1 135 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 MS4A5Q9H3V2 200 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 BRD7Q9NPI1 651 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 G6PC2Q9NQR9 355 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 ZNF701Q9NV72 531 aaPredicted RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 BEX4Q9NWD9 120 aaPredicted RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 CHCHD3Q9NX63 227 aaKnown RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 UBAP1Q9NZ09 502 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 PURGQ9UJV8 347 aaKnown RBP16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 PCDHGB5Q9Y5G0 923 aa16.58■□□□□ 0.24
PCOLCE-208ENST00000487172 ARFGEF3Q5TH69 2177 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 H7C417 338 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 J3QLW9 94 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 M0R233 179 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 RPP14O95059 124 aaKnown RBP16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 IGLV3-1P01715 115 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 CDK1P06493 297 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 ZNF19P17023 458 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 CRHBPP24387 322 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 ETV1P50549 477 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 MFGE8Q08431 387 aaPredicted RBP16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 TIGD6Q17RP2 521 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 MRPL21Q7Z2W9 205 aaKnown RBP16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 ELMOD2Q8IZ81 293 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 OR2AE1Q8NHA4 323 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 HAVCR2Q8TDQ0 301 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 MYDGFQ969H8 173 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 RNF166Q96A37 237 aaPredicted RBP16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 REEP6Q96HR9 211 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 C4orf36Q96KX1 117 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 CACNG6Q9BXT2 260 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 CYSLTR2Q9NS75 346 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 ACOXLQ9NUZ1 547 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 OR52A1Q9UKL2 312 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 LRRC42Q9Y546 428 aa16.57■□□□□ 0.24
PCOLCE-208ENST00000487172 A0A1W2PPW3 197 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 IQCF6A8MYZ5 107 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 PTGES3LE9PB15 166 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 C21orf33P30042 268 aaPredicted RBP16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 MMP15P51511 669 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 DEFB113Q30KQ7 82 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 ALKBH6Q3KRA9 238 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 TMPRSS11AQ6ZMR5 421 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 CATSPERDQ86XM0 798 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 PELI1Q96FA3 418 aa16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 YTHDF1Q9BYJ9 559 aaKnown RBP16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 ISG20L2Q9H9L3 353 aaKnown RBP16.56■□□□□ 0.24
PCOLCE-208ENST00000487172 TIMM8AO60220 97 aaPredicted RBP16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 TTRP02766 147 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms