RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 PHYHO14832 338 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 LCATP04180 440 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 DBTP11182 482 aaKnown RBP16.33■□□□□ 0.2
USP11-205ENST00000467378 HSD11B1P28845 292 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 ATP6V1E1P36543 226 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 CX3CR1P49238 355 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 SNRPD2P62316 118 aaKnown RBP16.33■□□□□ 0.2
USP11-205ENST00000467378 ZNF91Q05481 1191 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 SMN1Q16637 294 aaKnown RBP16.33■□□□□ 0.2
USP11-205ENST00000467378 DEGS2Q6QHC5 323 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 PRSS45Q7RTY3 260 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 KRT77Q7Z794 578 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.33■□□□□ 0.2
USP11-205ENST00000467378 ZNF679Q8IYX0 411 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 C8orf59Q8N0T1 100 aaPredicted RBP16.33■□□□□ 0.2
USP11-205ENST00000467378 ZNF283Q8N7M2 679 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 OR5L1Q8NGL2 311 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 CNIH3Q8TBE1 160 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 TBX5Q99593 518 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 AMBNQ9NP70 447 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 MRPS18AQ9NVS2 196 aaKnown RBP16.33■□□□□ 0.2
USP11-205ENST00000467378 LRP12Q9Y561 859 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 PMF1-BGLAPU3KQ54 211 aa16.33■□□□□ 0.2
USP11-205ENST00000467378 A0A1W2PQL4 384 aaPredicted RBP16.32■□□□□ 0.2
USP11-205ENST00000467378 C5orf63A6NC05 138 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 PSMD9O00233 223 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 GCH1P30793 250 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 SLC6A9P48067 706 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 KLF3P57682 345 aaPredicted RBP16.32■□□□□ 0.2
USP11-205ENST00000467378 PSG7Q13046 419 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 CDK5R2Q13319 367 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 SNAI3Q3KNW1 292 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 ZNF322Q6U7Q0 402 aaPredicted RBP16.32■□□□□ 0.2
USP11-205ENST00000467378 SSX6Q7RTT6 188 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 FBLIM1Q8WUP2 373 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 CMBLQ96DG6 245 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 LGALS12Q96DT0 336 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 MROQ9BYG7 248 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 TTTY10Q9BZA0 68 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 NIPAL2Q9H841 368 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 PTTG3PQ9NZH4 202 aa16.32■□□□□ 0.2
USP11-205ENST00000467378 RPL36Q9Y3U8 105 aaKnown RBP16.32■□□□□ 0.2
USP11-205ENST00000467378 H7C417 338 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 MAGEB4O15481 346 aaPredicted RBP16.31■□□□□ 0.2
USP11-205ENST00000467378 ZNF254O75437 659 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 APOC1P02654 83 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 SLC2A1P11166 492 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 BMP4P12644 408 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 DCTDP32321 178 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 VHLP40337 213 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 PPOXP50336 477 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 SELENOVP59797 346 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 ZNF85Q03923 595 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 EGR3Q06889 387 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 LAIR2Q6ISS4 152 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 IZUMO2Q6UXV1 221 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 FBXW12Q6X9E4 464 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 OR10H4Q8NGA5 316 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 HAVCR1Q96D42 359 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 TAAR3PQ9P1P4 343 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 LPAR3Q9UBY5 353 aa16.31■□□□□ 0.2
USP11-205ENST00000467378 FBXO9Q9UK97 447 aaPredicted RBP16.31■□□□□ 0.2
USP11-205ENST00000467378 NDUFS7O75251 213 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 IGHV4-39P01824 125 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 RAC2P15153 192 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 ZNF121P58317 390 aaPredicted RBP16.3■□□□□ 0.2
USP11-205ENST00000467378 HLXQ14774 488 aaPredicted RBP16.3■□□□□ 0.2
USP11-205ENST00000467378 ALKBH6Q3KRA9 238 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 ZNF684Q5T5D7 378 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 THAP5Q7Z6K1 395 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 SHARPINQ9H0F6 387 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 ZNF319Q9P2F9 582 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 MRM2Q9UI43 246 aaKnown RBP16.3■□□□□ 0.2
USP11-205ENST00000467378 IKZF2Q9UKS7 526 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 PCDHGB1Q9Y5G3 927 aa16.3■□□□□ 0.2
USP11-205ENST00000467378 A0A1W2PPW3 197 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 ANXA2P07355 339 aaKnown RBP16.29■□□□□ 0.2
USP11-205ENST00000467378 ADRA2AP08913 450 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 KITLGP21583 273 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 ALDH3B1P43353 468 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 MMP15P51511 669 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 RIDAP52758 137 aaKnown RBP16.29■□□□□ 0.2
USP11-205ENST00000467378 RAB40BQ12829 278 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 GK2Q14410 553 aaPredicted RBP16.29■□□□□ 0.2
USP11-205ENST00000467378 MOGQ16653 247 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 KLHL22Q53GT1 634 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 DNM1P46Q6ZS02 220 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 ZCCHC24Q8N2G6 241 aaKnown RBP16.29■□□□□ 0.2
USP11-205ENST00000467378 RHNO1Q9BSD3 238 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 SP140LQ9H930 580 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 PURGQ9UJV8 347 aaKnown RBP16.29■□□□□ 0.2
USP11-205ENST00000467378 MYRFQ9Y2G1 1151 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 N6AMT1Q9Y5N5 214 aa16.29■□□□□ 0.2
USP11-205ENST00000467378 M0R233 179 aa16.28■□□□□ 0.2
USP11-205ENST00000467378 SRSF10O75494 262 aaKnown RBP16.28■□□□□ 0.2
USP11-205ENST00000467378 THBS2P35442 1172 aa16.28■□□□□ 0.2
USP11-205ENST00000467378 PSMA6P60900 246 aaKnown RBP16.28■□□□□ 0.2
USP11-205ENST00000467378 ACTC1P68032 377 aa16.28■□□□□ 0.2
USP11-205ENST00000467378 ACTA1P68133 377 aa16.28■□□□□ 0.2
USP11-205ENST00000467378 ZNF92Q03936 586 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms