RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LIPFP07098 398 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 CA6P23280 308 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 DBPQ10586 325 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-219ENST00000440240 MPPED2Q15777 294 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 SLC35F1Q5T1Q4 408 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 GPR157Q5UAW9 335 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 ZNF841Q6ZN19 808 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 MAP6Q96JE9 813 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 NSMCE2Q96MF7 247 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 FN3KQ9H479 309 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 IL1RAPQ9NPH3 570 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 MRPL22Q9NWU5 206 aaKnown RBP17.28■□□□□ 0.36
CPNE1-219ENST00000440240 KIF17Q9P2E2 1029 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 ERVK-18Q9QC07 812 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 NDUFA2O43678 99 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 RRM2P31350 389 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 FGF12P61328 243 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.27■□□□□ 0.36
CPNE1-219ENST00000440240 PRAMEF6Q5VXH4 476 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 RPL13AP3Q6NVV1 102 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 ZNF620Q6ZNG0 422 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 OR2T4Q8NH00 348 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 TMIGD2Q96BF3 282 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 NOX4Q9NPH5 578 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 TRIM36Q9NQ86 728 aa17.27■□□□□ 0.36
CPNE1-219ENST00000440240 A0A1B0GUS0 222 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 GGT3PA6NGU5 568 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 HOXA3O43365 443 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-219ENST00000440240 KRT36O76013 467 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 PTBP3O95758 552 aaKnown RBP17.26■□□□□ 0.35
CPNE1-219ENST00000440240 DEFB112Q30KQ8 113 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 SAMD4BQ5PRF9 694 aaKnown RBP17.26■□□□□ 0.35
CPNE1-219ENST00000440240 DRAM2Q6UX65 266 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 BRD3OSQ6XYD6 125 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 SPATC1Q76KD6 591 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 SPERTQ8NA61 448 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 C19orf18Q8NEA5 215 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 PROKR2Q8NFJ6 384 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 OR52L1Q8NGH7 329 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 OR4C15Q8NGM1 316 aa17.26■□□□□ 0.35
CPNE1-219ENST00000440240 MRPL15Q9P015 296 aaKnown RBP17.26■□□□□ 0.35
CPNE1-219ENST00000440240 LGALS8O00214 317 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 CRYBA1P05813 215 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 OTX1P32242 354 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-219ENST00000440240 HMGA2P52926 109 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 ZNF92Q03936 586 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 MZT1Q08AG7 82 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 ZNF362Q5T0B9 420 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-219ENST00000440240 LINC00471Q8N535 108 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 TECTBQ96PL2 329 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 DDOQ99489 341 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 ADAT1Q9BUB4 502 aaKnown RBP17.25■□□□□ 0.35
CPNE1-219ENST00000440240 MMADHCQ9H3L0 296 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-219ENST00000440240 IL20Q9NYY1 176 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 CD300AQ9UGN4 299 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 MMP24Q9Y5R2 645 aa17.25■□□□□ 0.35
CPNE1-219ENST00000440240 TRAV38-1A0A0B4J264 116 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 MDFIC2A0A1B0GVS7 189 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 SRRM5B3KS81 715 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 C22orf46C9J442 243 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 P2RY10O00398 339 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 ARPC2O15144 300 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 MDKP21741 143 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-219ENST00000440240 PYCR1P32322 319 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 MSX2P35548 267 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-219ENST00000440240 SNAI3Q3KNW1 292 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 SFRP4Q6FHJ7 346 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-219ENST00000440240 PGBD2Q6P3X8 592 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 TREML4Q6UXN2 200 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 ZDHHC21Q8IVQ6 265 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 PGAM4Q8N0Y7 254 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 FAM71F1Q96KD3 344 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-219ENST00000440240 CDRT15Q96T59 188 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 PCGF1Q9BSM1 259 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 OPA3Q9H6K4 179 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 EGLN3Q9H6Z9 239 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 CDH10Q9Y6N8 788 aa17.24■□□□□ 0.35
CPNE1-219ENST00000440240 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-219ENST00000440240 ZNF879B4DU55 563 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 BHLHE40O14503 412 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 RPS27P42677 84 aaKnown RBP17.23■□□□□ 0.35
CPNE1-219ENST00000440240 TAF13Q15543 124 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 OR8B8Q15620 311 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 C11orf91Q3C1V1 193 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 SPATS1Q496A3 300 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 Q6YL49 198 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 DCXRQ7Z4W1 244 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 BOLLQ8N9W6 283 aaKnown RBP17.23■□□□□ 0.35
CPNE1-219ENST00000440240 PNLDC1Q8NA58 520 aaKnown RBP17.23■□□□□ 0.35
CPNE1-219ENST00000440240 CYB561A3Q8NBI2 242 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 OR2AE1Q8NHA4 323 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 C14orf119Q9NWQ9 140 aa17.23■□□□□ 0.35
CPNE1-219ENST00000440240 FAM181BA6NEQ2 426 aa17.22■□□□□ 0.35
CPNE1-219ENST00000440240 OOEPA6NGQ2 149 aa17.22■□□□□ 0.35
CPNE1-219ENST00000440240 TVP23AA6NH52 213 aa17.22■□□□□ 0.35
CPNE1-219ENST00000440240 C3orf80F5H4A9 247 aa17.22■□□□□ 0.35
CPNE1-219ENST00000440240 TNFRSF13BO14836 293 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-219ENST00000440240 KCNAB3O43448 404 aa17.22■□□□□ 0.35
CPNE1-219ENST00000440240 ADAM20O43506 726 aa17.22■□□□□ 0.35
CPNE1-219ENST00000440240 SNX3O60493 162 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms