RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 C2orf92A0A1B0GVN3 265 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 A0A1B0GX12 115 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ANTXRLA6NF34 631 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OOEPA6NGQ2 149 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SNRPGP15A8MWD9 76 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 I3L521 148 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SLC33A1O00400 549 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ZNF593O00488 134 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CDC42EP2O14613 210 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 FABP7O15540 132 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 TSC22D2O75157 780 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 KHDRBS3O75525 346 aaKnown RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CLDN14O95500 239 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 TIMP1P01033 207 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 HOXC4P09017 264 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 TACSTD2P09758 323 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 UCHL1P09936 223 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 BTCP35070 178 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CD79BP40259 229 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 PRPS1P60891 318 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SRP54P61011 504 aaKnown RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 NTHL1P78549 312 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 DHODHQ02127 395 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SSBP1Q04837 148 aaKnown RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SLC3A1Q07837 685 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 STX4Q12846 297 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CRMP1Q14194 572 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 FCN2Q15485 313 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OR1Q1Q15612 314 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 MLF2Q15773 248 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 HFEQ30201 348 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 NDUFAF6Q330K2 333 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ACSM3Q53FZ2 586 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 KLHL26Q53HC5 615 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 FAM198BQ6UWH4 519 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 RTL4Q6ZR62 310 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ASB18Q6ZVZ8 466 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 Q75L30 129 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CEACAM19Q7Z692 300 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 COMMD7Q86VX2 200 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SLC35F2Q8IXU6 374 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 C1orf87Q8N0U7 546 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OR6V1Q8N148 313 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 UBE2J2Q8N2K1 259 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SPICQ8N5J4 248 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 TMEM99Q8N816 258 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 MRPL43Q8N983 215 aaKnown RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 FAM71CQ8NEG0 241 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 BBS1Q8NFJ9 593 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OR7G2Q8NG99 324 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OR4E2Q8NGC2 313 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OR13C2Q8NGS9 318 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 LGALS14Q8TCE9 139 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SECTM1Q8WVN6 248 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 LCN9Q8WX39 176 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ING5Q8WYH8 240 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SMARCD2Q92925 531 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 YIPF5Q969M3 257 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SPSB1Q96BD6 273 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 OMA1Q96E52 524 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ZNF578Q96N58 590 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 GPX7Q96SL4 187 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SDF2Q99470 211 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 DDOQ99489 341 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CMKLR1Q99788 373 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 PELOQ9BRX2 385 aaKnown RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ZNF649Q9BS31 505 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SPXQ9BT56 116 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 LMF2Q9BU23 707 aaKnown RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 CACNG6Q9BXT2 260 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SLC19A3Q9BZV2 496 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ZNF436Q9C0F3 470 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 COMMD4Q9H0A8 199 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 LINC00597Q9H2U6 94 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 UBTD1Q9HAC8 227 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ADAP2Q9NPF8 381 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 MED9Q9NWA0 146 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 MED11Q9P086 117 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 KCNN3Q9UGI6 736 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 ZNF223Q9UK11 482 aaPredicted RBP4.39□□□□□ -1.71
LINC00458-202ENST00000427299 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 KCNK6Q9Y257 313 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SIGLEC7Q9Y286 467 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 FKBP7Q9Y680 259 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 SLC22A7Q9Y694 548 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 HEATR5AQ86XA9 2040 aa4.39□□□□□ -1.71
LINC00458-202ENST00000427299 TRBV2A0A0J9YWF9 115 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 A0A1W2PRG6 482 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 LILRA5A6NI73 299 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 ZSCAN5BA6NJL1 495 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 FAM183AA6NL82 134 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 EFCAB7A8K855 629 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 LEUTXA8MZ59 168 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 C4orf51C9J302 202 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 TRIM77I1YAP6 450 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 J3QLW9 94 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 GPR171O14626 319 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 BET1O15155 118 aa4.38□□□□□ -1.71
LINC00458-202ENST00000427299 LCMT2O60294 686 aaKnown RBP4.38□□□□□ -1.71
LINC00458-202ENST00000427299 ZG16O60844 167 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms