RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF207O43670 478 aaKnown RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC19A2O60779 497 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 NIPSNAP2O75323 286 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 CLDN11O75508 207 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 CDK14O94921 469 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 FARS2O95363 451 aaKnown RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 UTS2O95399 124 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ETHE1O95571 254 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 C6orf47O95873 294 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 KRT16P08779 473 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ACSM4P0C7M7 580 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 PSMC3P17980 439 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC2A5P22732 501 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 RORCP51449 518 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 MAP3K7CLP57077 242 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR2B6P58173 313 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 RAP1AP62834 184 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 CACNG7P62955 275 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 CTAG1AP78358 180 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 STX3Q13277 289 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 STK38Q15208 465 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 TNXAQ16473 311 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 PSG3Q16557 428 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 POU2AF1Q16633 256 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 TRMT5Q32P41 509 aaKnown RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF684Q5T5D7 378 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ADNP2Q6IQ32 1131 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ANKRD26P1Q6NSI1 321 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 DNAJC24Q6P3W2 148 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 SHISA6Q6ZSJ9 500 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 H2AFVQ71UI9 128 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 PID1Q7Z2X4 250 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 LHFPL3Q86UP9 236 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 UBALD2Q8IYN6 164 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ARHGAP18Q8N392 663 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 MREGQ8N565 214 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR51F2Q8NH61 342 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 TMEM54Q969K7 222 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 RMI2Q96E14 147 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 ARL5BQ96KC2 179 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 C9orf72Q96LT7 481 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 JSRP1Q96MG2 331 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR5B12Q96R08 314 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 CYTH2Q99418 400 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 OSBPL10Q9BXB5 764 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 UPF3BQ9BZI7 483 aaKnown RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR52A5Q9H2C5 316 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 GOLPH3Q9H4A6 298 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 CD209Q9NNX6 404 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 MRM2Q9UI43 246 aaKnown RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 DDX19BQ9UMR2 479 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 FLVCR2Q9UPI3 526 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 MRPS18BQ9Y676 258 aaKnown RBP2.23□□□□□ -2.05
HMGB1P49-201ENST00000418882 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 A0A1B0GW15 77 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 RAB19A4D1S5 217 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 TRPC5OSA6NMA1 111 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 K7EN84 100 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 MRPS12O15235 138 aaKnown RBP2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 MGRN1O60291 552 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 SC5DO75845 299 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 MPZL1O95297 269 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 GNAO1P09471 354 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 LINC00869P0C866 280 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 CSKP41240 450 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 GPR1P46091 355 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 CYB561P49447 251 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 SERPINB8P50452 374 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 ACTG2P63267 376 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 SLC25A11Q02978 314 aaKnown RBP2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF92Q03936 586 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 PMS2P3Q13401 168 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 TRAM2Q15035 370 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 NCF4Q15080 339 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 CEMP1Q6PRD7 247 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 SNX20Q7Z614 316 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 CBLN2Q8IUK8 224 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 MYOCDQ8IZQ8 938 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 SYS1Q8N2H4 156 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 KIF2BQ8N4N8 673 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 ARRDC1Q8N5I2 433 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 EID2Q8N6I1 236 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 OR52P1PQ8NH57 321 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 ZNF502Q8TBZ5 544 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 FAM131CQ96AQ9 280 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 RPEQ96AT9 228 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 ECHDC3Q96DC8 303 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 C8orf76Q96K31 380 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 HSFY1Q96LI6 401 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 LINC00477Q96M19 166 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 GLT1D1Q96MS3 346 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 TRNT1Q96Q11 434 aaKnown RBP2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 SH3GL1Q99961 368 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 DEFB129Q9H1M3 183 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 C1orf198Q9H425 327 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 PIGUQ9H490 435 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 KIR3DX1Q9H7L2 352 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 CHMP5Q9NZZ3 219 aa2.22□□□□□ -2.05
HMGB1P49-201ENST00000418882 NXT1Q9UKK6 140 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms