RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MEDAGQ5VYS4 303 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 SLX4IPQ5VYV7 408 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 CFAP77Q6ZQR2 320 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 RFPL4BQ6ZWI9 263 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 CXXC5Q7LFL8 322 aaKnown RBP5.42□□□□□ -1.54
USP54-202ENST00000413442 CPOQ8IVL8 374 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 TIGD4Q8IY51 512 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 RFLNBQ8N5W9 214 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 ZNF511Q8NB15 262 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 OR2Z1Q8NG97 314 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 OR8J1Q8NGP2 316 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 OR11L1Q8NGX0 322 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 CLDND2Q8NHS1 167 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 Q8TCH9 128 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 HAVCR2Q8TDQ0 301 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 CCL17Q92583 94 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 HTRA1Q92743 480 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 YIPF5Q969M3 257 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 MAP6Q96JE9 813 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 COPS4Q9BT78 406 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 MROQ9BYG7 248 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 OR10A2Q9H208 303 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 OR51B6Q9H340 312 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 RNPEPL1Q9HAU8 725 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 CENPMQ9NSP4 180 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 TMEM106BQ9NUM4 274 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 VNN3Q9NY84 501 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 MIOXQ9UGB7 285 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 WARS2Q9UGM6 360 aaKnown RBP5.42□□□□□ -1.54
USP54-202ENST00000413442 FZR1Q9UM11 496 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 PCDHB10Q9UN67 800 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 ABCA1O95477 2261 aa5.42□□□□□ -1.54
USP54-202ENST00000413442 ACANP16112 2415 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 A0A0U1RQV5 110 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 GGT3PA6NGU5 568 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ZSCAN5BA6NJL1 495 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 DHRS7CA6NNS2 312 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ZAR1LA6NP61 321 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 CD300LBA8K4G0 201 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TMEM178BH3BS89 294 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 LY6HO94772 140 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 SOX14O95416 240 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 OR2T7P0C7T2 308 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ZNF12P17014 697 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 PRKACGP22612 351 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 PYCR1P32322 319 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 MDH2P40926 338 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 NAA10P41227 235 aaPredicted RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 MAP2K3P46734 347 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 SLC6A9P48067 706 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 DAPP51397 102 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 CDC42P60953 191 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 IL5RAQ01344 420 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 EGR3Q06889 387 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 EIF2B1Q14232 305 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 MEP1BQ16820 701 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 SPATA46Q5T0L3 261 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 CD276Q5ZPR3 534 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 CORO6Q6QEF8 472 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 MEPCEQ7L2J0 689 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 NLRC3Q7RTR2 1065 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 DPY19L4Q7Z388 723 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 KRT77Q7Z794 578 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TMEM179BQ7Z7N9 219 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ERI1Q8IV48 349 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 ZNF679Q8IYX0 411 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 OR9Q1Q8NGQ5 310 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 OR6K6Q8NGW6 343 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 OR6N2Q8NGY6 317 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 OR2T27Q8NH04 317 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TMEM163Q8TC26 289 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 THEM6Q8WUY1 208 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ZFAND2BQ8WV99 257 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TMEM158Q8WZ71 300 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TMEM186Q96B77 213 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 MRPL48Q96GC5 212 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 MEGF10Q96KG7 1140 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 RDH12Q96NR8 316 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 JMJD8Q96S16 334 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ABHD6Q9BV23 337 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 OR51V1Q9H2C8 321 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 ZNF665Q9H7R5 613 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 MOB1AQ9H8S9 216 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 FN3KRPQ9HA64 309 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 PATZ1Q9HBE1 687 aaKnown RBP5.41□□□□□ -1.54
USP54-202ENST00000413442 MSL2Q9HCI7 577 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TVP23BQ9NYZ1 205 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 USE1Q9NZ43 259 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 PTTG3PQ9NZH4 202 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 LAMP5Q9UJQ1 280 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.41□□□□□ -1.54
USP54-202ENST00000413442 LRCH1Q9Y2L9 728 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 BOLA1Q9Y3E2 137 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 WIPI2Q9Y4P8 454 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 DOCK11Q5JSL3 2073 aa5.41□□□□□ -1.54
USP54-202ENST00000413442 TRAV38-1A0A0B4J264 116 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 A0A0G2JMP0 313 aa5.4□□□□□ -1.54
USP54-202ENST00000413442 A0A0X1KG70 313 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms