RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CD163Q86VB7 1156 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 ZNF101Q8IZC7 436 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 OR5AS1Q8N127 324 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 ZNF283Q8N7M2 679 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 AGBL5Q8NDL9 886 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 STEAP2Q8NFT2 490 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 OR10R2Q8NGX6 335 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 MAFAQ8NHW3 353 aaPredicted RBP14.89□□□□□ -0.03
NUP50-203ENST00000407019 FAM71F1Q96KD3 344 aaPredicted RBP14.89□□□□□ -0.03
NUP50-203ENST00000407019 SOX7Q9BT81 388 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 IFT46Q9NQC8 304 aa14.89□□□□□ -0.03
NUP50-203ENST00000407019 OR14I1A6ND48 311 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 I3L521 148 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 PDGFAP04085 211 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 CCL1P22362 96 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 CXADRP78310 365 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 SORDQ00796 357 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 CLVS2Q5SYC1 327 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 FAM57BQ71RH2 274 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 DOK3Q7L591 496 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 OR2W3Q7Z3T1 314 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 GVQW1Q8N7I0 195 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 M1APQ8TC57 530 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 ANGPTL4Q9BY76 406 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 ARL6Q9H0F7 186 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 ZNF319Q9P2F9 582 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 PLEKHA6Q9Y2H5 1048 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 MRPS28Q9Y2Q9 187 aaKnown RBP14.88□□□□□ -0.03
NUP50-203ENST00000407019 HS3ST3B1Q9Y662 390 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 SHOXO15266 292 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 CCL3P10147 92 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 GNB3P16520 340 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 DHRS2Q13268 280 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 TRA2AQ13595 282 aaKnown RBP eCLIP14.88□□□□□ -0.03
NUP50-203ENST00000407019 LY6G6FQ5SQ64 297 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 SFRP5Q5T4F7 317 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 GLIPR1L1Q6UWM5 242 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 DTWD2Q8NBA8 298 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 SPACA5Q96QH8 159 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 SELENOIQ9C0D9 397 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 FBXO4Q9UKT5 387 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 VSIG4Q9Y279 399 aa14.88□□□□□ -0.03
NUP50-203ENST00000407019 PHF3Q92576 2039 aaKnown RBP14.87□□□□□ -0.03
NUP50-203ENST00000407019 RFPL4AA6NLU0 287 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 RFPL4AL1F8VTS6 287 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 NTN3O00634 580 aaPredicted RBP14.87□□□□□ -0.03
NUP50-203ENST00000407019 CHRM2P08172 466 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 LIFP15018 202 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 CD34P28906 385 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 CSNK1A1P48729 337 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 SSR4P51571 173 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 DSCR4P56555 118 aaPredicted RBP14.87□□□□□ -0.03
NUP50-203ENST00000407019 LSM6P62312 80 aaKnown RBP14.87□□□□□ -0.03
NUP50-203ENST00000407019 H3F3AP84243 136 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 SGCAQ16586 387 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 AANATQ16613 207 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 RAET1LQ5VY80 246 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 OR52W1Q6IF63 320 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 C17orf107Q6ZR85 190 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 ZDHHC22Q8N966 263 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 PI4KAP42356 2102 aa14.87□□□□□ -0.03
NUP50-203ENST00000407019 B3GALNT1O75752 331 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 KLF7O75840 302 aaPredicted RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 HLA-AP01891 365 aaKnown RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 HCKP08631 526 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 CCL4P13236 92 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 RPA2P15927 270 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 MSR1P21757 451 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 ANOS1P23352 680 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 GUCA1AP43080 201 aaPredicted RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 DUSP3P51452 185 aaPredicted RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 GFOD2Q3B7J2 385 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 SLC22A6Q4U2R8 563 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 LPCAT3Q6P1A2 487 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 RNF144BQ7Z419 303 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 OR5M8Q8NGP6 311 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 GNRHR2Q96P88 292 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 CDX2Q99626 313 aaPredicted RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 ZNF416Q9BWM5 594 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 LPAR5Q9H1C0 372 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 DKKL1Q9UK85 242 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 TMA7Q9Y2S6 64 aaKnown RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 NOP16Q9Y3C1 178 aaKnown RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 EIF1BO60739 113 aaKnown RBP14.86□□□□□ -0.03
NUP50-203ENST00000407019 TDGF1P13385 188 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 TBPP20226 339 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 OR3A4PP47883 348 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 MC2RQ01718 297 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 SLC25A42Q86VD7 318 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 NAXDQ8IW45 347 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 PAQR8Q8TEZ7 354 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 TMEM54Q969K7 222 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 NICN1Q9BSH3 213 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 PROK2Q9HC23 129 aa14.86□□□□□ -0.03
NUP50-203ENST00000407019 TRAV14DV4A0A0A6YYC5 116 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 PATE3B3GLJ2 98 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 SSX5O60225 188 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 STK17BO94768 372 aa14.85□□□□□ -0.03
NUP50-203ENST00000407019 MPIG6BO95866 241 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms