RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TREM2Q9NZC2 230 aa15.28■□□□□ 0.04
PTPRA-205ENST00000399903 FREM3P0C091 2139 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 ABHD16AO95870 558 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 RENP00797 406 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 IGKV1D-16P01601 117 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 HPGDP15428 266 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 CLDN6P56747 220 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 MFGE8Q08431 387 aaPredicted RBP15.27■□□□□ 0.04
PTPRA-205ENST00000399903 RSU1Q15404 277 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 ZNHIT3Q15649 155 aaPredicted RBP15.27■□□□□ 0.04
PTPRA-205ENST00000399903 UNQ6494/PRO21346Q6UXR6 183 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 HIST2H3AQ71DI3 136 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 ZNF595Q8IYB9 648 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 OR2I1PQ8NGU4 316 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 ADAMTS17Q8TE56 1095 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 OR10C1Q96KK4 312 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 SPACA7Q96KW9 195 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 NUDT9Q9BW91 350 aa15.27■□□□□ 0.04
PTPRA-205ENST00000399903 HRKO00198 91 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 SDCBPO00560 298 aaPredicted RBP15.27■□□□□ 0.03
PTPRA-205ENST00000399903 DUS4LO95620 317 aaKnown RBP15.27■□□□□ 0.03
PTPRA-205ENST00000399903 ALOX5APP20292 161 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 P2RY4P51582 365 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 NFATC4Q14934 902 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF550Q7Z398 422 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 OR4C3Q8NH37 302 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 MCHR2Q969V1 340 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 MRGPRFQ96AM1 343 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF727A8MUV8 499 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 OR2C1O95371 312 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 CSRP1P21291 193 aaKnown RBP15.27■□□□□ 0.03
PTPRA-205ENST00000399903 HGFACQ04756 655 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 DRAM2Q6UX65 266 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF101Q8IZC7 436 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 UBAC2Q8NBM4 344 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 OR4D6Q8NGJ1 314 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 OR4K15Q8NH41 348 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 NMNAT2Q9BZQ4 307 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 CENPMQ9NSP4 180 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 GAR1Q9NY12 217 aaKnown RBP15.27■□□□□ 0.03
PTPRA-205ENST00000399903 EMC9Q9Y3B6 208 aa15.27■□□□□ 0.03
PTPRA-205ENST00000399903 C2CD4DB7Z1M9 353 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 SLC34A2O95436 690 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 GABRG2P18507 467 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 RPS4Y1P22090 263 aaKnown RBP15.26■□□□□ 0.03
PTPRA-205ENST00000399903 CASP6P55212 293 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 PRPS1P60891 318 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 CDC20BQ86Y33 519 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 CCDC54Q8NEL0 328 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 MFSD8Q8NHS3 518 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 C14orf144Q96I85 54 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF587Q96SQ5 575 aaPredicted RBP15.26■□□□□ 0.03
PTPRA-205ENST00000399903 KCNJ16Q9NPI9 418 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 EML5Q05BV3 1969 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 XKRYO14609 159 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 IGHV2-5P01817 119 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 CYCSP99999 105 aaKnown RBP15.26■□□□□ 0.03
PTPRA-205ENST00000399903 KIR3DX1Q9H7L2 352 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 SLC2A4RGQ9NR83 387 aa15.26■□□□□ 0.03
PTPRA-205ENST00000399903 HTR5AP47898 357 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 CAMLGP49069 296 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ARRB1P49407 418 aaPredicted RBP15.25■□□□□ 0.03
PTPRA-205ENST00000399903 GUK1Q16774 197 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 C4orf17Q53FE4 359 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ASPHD2Q6ICH7 369 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 SLC22A18ASQ8N1D0 253 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 FAM3CQ92520 227 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 POM121Q96HA1 1249 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ARPC3O15145 178 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 NUDT14O95848 222 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 HNRNPA2B1P22626 353 aaKnown RBP15.25■□□□□ 0.03
PTPRA-205ENST00000399903 GAMTQ14353 236 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 SURF2Q15527 256 aaPredicted RBP15.25■□□□□ 0.03
PTPRA-205ENST00000399903 GFI1BQ5VTD9 330 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 METTL27Q8N6F8 245 aaPredicted RBP15.25■□□□□ 0.03
PTPRA-205ENST00000399903 RCBTB1Q8NDN9 531 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF426Q9BUY5 554 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 HRASLS2Q9NWW9 162 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 FBXL21Q9UKT6 434 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 SPACA6W5XKT8 324 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 WDFY3Q8IZQ1 3526 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 FANCMQ8IYD8 2048 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 GPR89AB7ZAQ6 455 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 SLC16A7O60669 478 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 FCGR3AP08637 254 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 GPR89BP0CG08 455 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ZNF84P51523 738 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 NAAAQ02083 359 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 RPL18Q07020 188 aaKnown RBP15.25■□□□□ 0.03
PTPRA-205ENST00000399903 ERV3-1Q14264 604 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 FIGLAQ6QHK4 219 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 LURAP1Q96LR2 239 aa15.25■□□□□ 0.03
PTPRA-205ENST00000399903 AK1P00568 194 aa15.24■□□□□ 0.03
PTPRA-205ENST00000399903 CD5P06127 495 aa15.24■□□□□ 0.03
PTPRA-205ENST00000399903 MESTQ5EB52 335 aa15.24■□□□□ 0.03
PTPRA-205ENST00000399903 CLEC18BQ6UXF7 455 aa15.24■□□□□ 0.03
PTPRA-205ENST00000399903 SAT2Q96F10 170 aaPredicted RBP15.24■□□□□ 0.03
PTPRA-205ENST00000399903 UNKLQ9H9P5 680 aaKnown RBP15.24■□□□□ 0.03
PTPRA-205ENST00000399903 A0A087WUJ7 227 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms