RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 PIMREGQ9BSJ6 248 aa17.35■□□□□ 0.37
CLDN3-201ENST00000395145 REPIN1Q9BWE0 567 aaKnown RBP17.35■□□□□ 0.37
CLDN3-201ENST00000395145 LRP12Q9Y561 859 aa17.35■□□□□ 0.37
CLDN3-201ENST00000395145 A0A1B0GWJ7 208 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 PRR32B1ATL7 298 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 XRCC2O43543 280 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 MPZL2O60487 215 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 ENTPD6O75354 484 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 ZNF254O75437 659 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 ANXA2P07355 339 aaKnown RBP17.34■□□□□ 0.37
CLDN3-201ENST00000395145 DCTDP32321 178 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 PSMA6P60900 246 aaKnown RBP17.34■□□□□ 0.37
CLDN3-201ENST00000395145 RIN1Q13671 783 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 USP51Q70EK9 711 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 MRPL21Q7Z2W9 205 aaKnown RBP17.34■□□□□ 0.37
CLDN3-201ENST00000395145 ENTHD1Q8IYW4 607 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 ZNF679Q8IYX0 411 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 RFLNBQ8N5W9 214 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 OR52H1Q8NGJ2 320 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 OR2AE1Q8NHA4 323 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 OR8B4Q96RC9 309 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 DECR2Q9NUI1 292 aa17.34■□□□□ 0.37
CLDN3-201ENST00000395145 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLDN3-201ENST00000395145 ACHEP22303 614 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 NR4A2P43354 598 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 CXCR4P61073 352 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 CARTPTQ16568 116 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 TSTQ16762 297 aaKnown RBP17.33■□□□□ 0.36
CLDN3-201ENST00000395145 FAM57BQ71RH2 274 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 OR5AS1Q8N127 324 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF540Q8NDQ6 660 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF555Q8NEP9 628 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 RHOXF1Q8NHV9 184 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 YIPF5Q969M3 257 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 SLC30A2Q9BRI3 323 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 MROQ9BYG7 248 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 CHODLQ9H9P2 273 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 SAP30LQ9HAJ7 183 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 TANC2Q9HCD6 1990 aa17.33■□□□□ 0.36
CLDN3-201ENST00000395145 CSPG4Q6UVK1 2322 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF670-ZNF695F2Z2N8 137 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 LYNX1G3V0Z9 82 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 SMAD7O15105 426 aaKnown RBP17.32■□□□□ 0.36
CLDN3-201ENST00000395145 RP2O75695 350 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 OR2T7P0C7T2 308 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 LYNX1P0DP58 116 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 COL8A2P25067 703 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 CRYBB2P43320 205 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 MTNR1AP48039 350 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 EGR3Q06889 387 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 LOXL1Q08397 574 aaPredicted RBP17.32■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF322Q6U7Q0 402 aaPredicted RBP17.32■□□□□ 0.36
CLDN3-201ENST00000395145 BIVMQ86UB2 503 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 OR13G1Q8NGZ3 307 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 OR2T27Q8NH04 317 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 ELMOD3Q96FG2 381 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 EGLN1Q9GZT9 426 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 OR10A2Q9H208 303 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF319Q9P2F9 582 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 NKX1-2Q9UD57 310 aaPredicted RBP17.32■□□□□ 0.36
CLDN3-201ENST00000395145 N6AMT1Q9Y5N5 214 aa17.32■□□□□ 0.36
CLDN3-201ENST00000395145 TLN2Q9Y4G6 2542 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 IGHV1-69-2A0A0G2JMI3 117 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 ACOD1A6NK06 481 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 SNTNA6NMZ2 147 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 CD300LBA8K4G0 201 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 PSMD9O00233 223 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 TPD52L2O43399 206 aaKnown RBP17.31■□□□□ 0.36
CLDN3-201ENST00000395145 TBX1O43435 398 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 LILRA1O75019 489 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 TNFSF4P23510 183 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 CFL1P23528 166 aaKnown RBP17.31■□□□□ 0.36
CLDN3-201ENST00000395145 RIDAP52758 137 aaKnown RBP17.31■□□□□ 0.36
CLDN3-201ENST00000395145 PRSS12P56730 875 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 TNFAIP6P98066 277 aaPredicted RBP17.31■□□□□ 0.36
CLDN3-201ENST00000395145 BHLHE23Q8NDY6 225 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 OR2Z1Q8NG97 314 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 SGK3Q96BR1 496 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 PGAM5Q96HS1 289 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 APOL4Q9BPW4 351 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 BPESC1Q9GZL8 116 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 RGCCQ9H4X1 137 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 FAM206AQ9NX38 181 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 IL19Q9UHD0 177 aa17.31■□□□□ 0.36
CLDN3-201ENST00000395145 YLPM1P49750 1951 aaKnown RBP17.31■□□□□ 0.36
CLDN3-201ENST00000395145 A0A1W2PQL4 384 aaPredicted RBP17.3■□□□□ 0.36
CLDN3-201ENST00000395145 TMEM33P57088 247 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 SLC34A1Q06495 639 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 TIGD6Q17RP2 521 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 TTC23Q5W5X9 447 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 SPRYD4Q8WW59 207 aaPredicted RBP17.3■□□□□ 0.36
CLDN3-201ENST00000395145 REEP6Q96HR9 211 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 Q96MT0 163 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 TTTY10Q9BZA0 68 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 RNPEPL1Q9HAU8 725 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 BRD7Q9NPI1 651 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF275Q9NSD4 429 aaPredicted RBP17.3■□□□□ 0.36
CLDN3-201ENST00000395145 TMEM100Q9NV29 134 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 AASSQ9UDR5 926 aa17.3■□□□□ 0.36
CLDN3-201ENST00000395145 ZNF391Q9UJN7 358 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms