RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 AWAT2Q6E213 333 aa16■□□□□ 0.15
CD40-201ENST00000372276 TRAPPC6BQ86SZ2 158 aa16■□□□□ 0.15
CD40-201ENST00000372276 FJX1Q86VR8 437 aa16■□□□□ 0.15
CD40-201ENST00000372276 ANGPTL5Q86XS5 388 aa16■□□□□ 0.15
CD40-201ENST00000372276 PAQR4Q8N4S7 273 aaPredicted RBP16■□□□□ 0.15
CD40-201ENST00000372276 CHST4Q8NCG5 386 aa16■□□□□ 0.15
CD40-201ENST00000372276 OR51E1Q8TCB6 317 aa16■□□□□ 0.15
CD40-201ENST00000372276 TMEM41AQ96HV5 264 aa16■□□□□ 0.15
CD40-201ENST00000372276 URM1Q9BTM9 101 aaKnown RBP16■□□□□ 0.15
CD40-201ENST00000372276 NELFAQ9H3P2 528 aa16■□□□□ 0.15
CD40-201ENST00000372276 ASH2LQ9UBL3 628 aa16■□□□□ 0.15
CD40-201ENST00000372276 KCNN3Q9UGI6 736 aa16■□□□□ 0.15
CD40-201ENST00000372276 HRH3Q9Y5N1 445 aa16■□□□□ 0.15
CD40-201ENST00000372276 A0A0U1RQV5 110 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 A0A1B0GW55 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 RPS10-NUDT3A0A1W2PQS6 291 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 TMEM235A6NFC5 223 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 B4E171 279 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 B3GALNT1O75752 331 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4L2P0CJ85 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4L3P0CJ86 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4L4P0CJ87 422 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4L5P0CJ88 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4L6P0CJ89 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4L7P0CJ90 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 CXCL2P19875 107 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 SFTPDP35247 375 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 FOLR3P41439 243 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 TSPAN7P41732 249 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 CX3CR1P49238 355 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 ZNF121P58317 390 aaPredicted RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 TAS2R31P59538 309 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 UBE2MP61081 183 aaKnown RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 FOXK1P85037 733 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 ATPAF1Q5TC12 328 aaPredicted RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 TMEM65Q6PI78 240 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 TMUB2Q71RG4 321 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 ABHD12BQ7Z5M8 362 aaPredicted RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 SLC25A42Q86VD7 318 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 ZNF283Q8N7M2 679 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 PNLDC1Q8NA58 520 aaKnown RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 ACBD4Q8NC06 268 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 OR8B12Q8NGG6 310 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 OR56B1Q8NGI3 324 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 OR5M1Q8NGP8 315 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 OR13C9Q8NGT0 318 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 RELTQ969Z4 430 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 ZC3H10Q96K80 434 aaKnown RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 SCGB3A2Q96PL1 93 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 PIGQQ9BRB3 760 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 SF3B5Q9BWJ5 86 aaKnown RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 TINAGL1Q9GZM7 467 aaPredicted RBP15.99■□□□□ 0.15
CD40-201ENST00000372276 SH2D2AQ9NP31 389 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 DUX4Q9UBX2 424 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 KLK13Q9UKR3 277 aa15.99■□□□□ 0.15
CD40-201ENST00000372276 NSG1A0A0A6YYJ2 146 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 A0A0D9SG52 128 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 NPIPA2E9PIF3 369 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 NPIPA3F8WFD2 350 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 LAMTOR5O43504 91 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 CD8AP01732 235 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 IFNA6P05013 189 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 GP1BAP07359 652 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 UMODP07911 640 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 RRASP10301 218 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 ZNF35P13682 527 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 THBS4P35443 961 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 ZNF84P51523 738 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 SUCLG1P53597 346 aaKnown RBP15.98■□□□□ 0.15
CD40-201ENST00000372276 CLDN17P56750 224 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 H2BFSP57053 126 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 RAC1P63000 192 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 ECH1Q13011 328 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 UNC119Q13432 240 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 NHLRC3Q5JS37 347 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 RTL6Q6ICC9 239 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 RFPL4BQ6ZWI9 263 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 RPS19BP1Q86WX3 136 aaKnown RBP15.98■□□□□ 0.15
CD40-201ENST00000372276 COMMD2Q86X83 199 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 ZNF101Q8IZC7 436 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 GALNT16Q8N428 558 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 TMEM156Q8N614 296 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 TMEM185BQ9H7F4 350 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 PNRC2Q9NPJ4 139 aaKnown RBP15.98■□□□□ 0.15
CD40-201ENST00000372276 GPR84Q9NQS5 396 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 HPF1Q9NWY4 346 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 DKKL1Q9UK85 242 aa15.98■□□□□ 0.15
CD40-201ENST00000372276 MRPS28Q9Y2Q9 187 aaKnown RBP15.98■□□□□ 0.15
CD40-201ENST00000372276 OR14I1A6ND48 311 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 LMX1BO60663 402 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 NAT1P18440 290 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 M6PRP20645 277 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 ALDH3B1P43353 468 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 PRKXP51817 358 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 MLF1P58340 268 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 CXADRP78310 365 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 MOGAT2Q3SYC2 334 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 CARD17Q5XLA6 110 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 KCNE4Q8WWG9 221 aa15.97■□□□□ 0.15
CD40-201ENST00000372276 PP6455Q8WZ26 134 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms