RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 A0A1B0GVI7 797 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 C5orf49A4QMS7 147 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 A8MXE2 369 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 LCATP04180 440 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 HOXB1P14653 301 aaPredicted RBP16.16■□□□□ 0.18
CLN3-206ENST00000360019 CA7P43166 264 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 PLP2Q04941 152 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 STAC2Q6ZMT1 411 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 MYPOPQ86VE0 399 aaPredicted RBP16.16■□□□□ 0.18
CLN3-206ENST00000360019 COMMD2Q86X83 199 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 LIX1LQ8IVB5 337 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 OR52H1Q8NGJ2 320 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 GFI1Q99684 422 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 SLC30A2Q9BRI3 323 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 MMP27Q9H306 513 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 ZNF275Q9NSD4 429 aaPredicted RBP16.16■□□□□ 0.18
CLN3-206ENST00000360019 A3GALT2U3KPV4 340 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 CFAP46Q8IYW2 2715 aa16.16■□□□□ 0.18
CLN3-206ENST00000360019 EEF1E1-BLOC1S5C9J1V9 151 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 EEF1E1O43324 174 aaKnown RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 SERPINA5P05154 406 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 CD2P06729 351 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 RAB3BP20337 219 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 CCNOP22674 350 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 BHLHA15Q7RTS1 189 aaPredicted RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 C17orf78Q8N4C9 275 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 SGK3Q96BR1 496 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 FAM71F1Q96KD3 344 aaPredicted RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 C1QTNF5Q9BXJ0 243 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 C6orf62Q9GZU0 229 aaPredicted RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 OR10A2Q9H208 303 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 PIGMQ9H3S5 423 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 TCF7L1Q9HCS4 588 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 AK6Q9Y3D8 172 aaKnown RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 EPG5Q9HCE0 2579 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 IQCMA0A1B0GVH7 501 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 ZNF14P17017 642 aaPredicted RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 ADRA2CP18825 462 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 HOXC12P31275 282 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 BMXP51813 675 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 CASP6P55212 293 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 COLCA1Q6ZS62 124 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 LRRTM1Q86UE6 522 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 PLPP7Q8NBV4 271 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 RELL2Q8NC24 303 aaPredicted RBP16.15■□□□□ 0.18
CLN3-206ENST00000360019 OR1J2Q8NGS2 313 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 OR2AE1Q8NHA4 323 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 OSGIN2Q9Y236 505 aa16.15■□□□□ 0.18
CLN3-206ENST00000360019 PRR14LQ5THK1 2151 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 A0A075B6Q4 140 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 A6NIN4 97 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 CELA3BP08861 270 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 ST3GAL2Q16842 350 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 SLC25A35Q3KQZ1 300 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 SFXN4Q6P4A7 337 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 DOK3Q7L591 496 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 MRGPRGQ86SM5 289 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 OR6Q1Q8NGQ2 317 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 OR14K1Q8NGZ2 314 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 RND1Q92730 232 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 FGGYQ96C11 551 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 ADAT3Q96EY9 351 aaPredicted RBP16.14■□□□□ 0.17
CLN3-206ENST00000360019 TAS2R4Q9NYW5 299 aa16.14■□□□□ 0.17
CLN3-206ENST00000360019 OR5H1A6NKK0 313 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 IGFBP3P17936 291 aaPredicted RBP16.13■□□□□ 0.17
CLN3-206ENST00000360019 FSTP19883 344 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 PSMB1P20618 241 aaKnown RBP16.13■□□□□ 0.17
CLN3-206ENST00000360019 APLNRP35414 380 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 MRPL49Q13405 166 aaKnown RBP16.13■□□□□ 0.17
CLN3-206ENST00000360019 GLYATL3Q5SZD4 288 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 TMEM211Q6ICI0 200 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 PAQR4Q8N4S7 273 aaPredicted RBP16.13■□□□□ 0.17
CLN3-206ENST00000360019 PARP16Q8N5Y8 322 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 SLC30A7Q8NEW0 376 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 SLITRK2Q9H156 845 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 JKAMPQ9P055 326 aa16.13■□□□□ 0.17
CLN3-206ENST00000360019 AGFG2O95081 481 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 MAS1P04201 325 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 IL32P24001 234 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 IDH3GP51553 393 aaPredicted RBP16.12■□□□□ 0.17
CLN3-206ENST00000360019 Q6ZSR3 168 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 REEP6Q96HR9 211 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 ZCCHC4Q9H5U6 513 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 CXorf56Q9H5V9 222 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 SP140LQ9H930 580 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 SMURF1Q9HCE7 757 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 FOXJ3Q9UPW0 622 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 V9GYS6 101 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 MYO7BQ6PIF6 2116 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 ZFYVE26Q68DK2 2539 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 NOTOA8MTQ0 251 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 CTDSP2O14595 271 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 IGKV3-15P01624 115 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 CBR1P16152 277 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 PAX7P23759 505 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 THBS2P35442 1172 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 FAM27E3Q08E93 113 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 DNAAF1Q8NEP3 725 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 S100PBPQ96BU1 408 aa16.12■□□□□ 0.17
CLN3-206ENST00000360019 C1QTNF6Q9BXI9 259 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms