RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CPT1CQ8TCG5 803 aa12.9□□□□□ -0.34
CXCL12-201ENST00000343575 ZNF416Q9BWM5 594 aa12.9□□□□□ -0.34
CXCL12-201ENST00000343575 PRSS50Q9UI38 385 aa12.9□□□□□ -0.34
CXCL12-201ENST00000343575 ZNF222Q9UK12 451 aa12.9□□□□□ -0.34
CXCL12-201ENST00000343575 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MBD3L4A6NDZ8 208 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MBD3L3A6NE82 208 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MBD3L5A6NJ08 208 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MT-ND5P03915 603 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 OR8G3PP0DMU2 310 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF823P16415 610 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 KIR2DL2P43627 348 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 CAV3P56539 151 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MRPS34P82930 218 aaKnown RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ROM1Q03395 351 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 AANATQ16613 207 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 BCL2L15Q5TBC7 163 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 SLC18B1Q6NT16 456 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 DCXRQ7Z4W1 244 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MBD3L2Q8NHZ7 208 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 SNX33Q8WV41 574 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 APH1AQ96BI3 265 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 C12orf49Q9H741 205 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 TMEM38BQ9NVV0 291 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ST6GALNAC2Q9UJ37 374 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MAB21L2Q9Y586 359 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 NBEAQ8NFP9 2946 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 INTS1Q8N201 2190 aaKnown RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 RPL36A-HNRNPH2H7BZ11 118 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 CELP19835 753 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ACTA2P62736 377 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ACTG2P63267 376 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 EGR3Q06889 387 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 EIF2B1Q14232 305 aaKnown RBP12.89□□□□□ -0.35
CXCL12-201ENST00000343575 SGCAQ16586 387 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 FAM27BQ5VT28 67 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 LRRN1Q6UXK5 716 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 C3P1Q6ZMU1 363 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 CFAP77Q6ZQR2 320 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF454Q8N9F8 522 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 OR8B4Q96RC9 309 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 TMED9Q9BVK6 235 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 GLRX2Q9NS18 164 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 MED9Q9NWA0 146 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 GLS2Q9UI32 602 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 GNG8Q9UK08 70 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF835Q9Y2P0 537 aa12.89□□□□□ -0.35
CXCL12-201ENST00000343575 RPS10-NUDT3A0A1W2PQS6 291 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 WDR1O75083 606 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 TCRBP04435 133 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 MSR1P21757 451 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 IL32P24001 234 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 PSMB10P40306 273 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 NANOS3P60323 173 aaKnown RBP12.88□□□□□ -0.35
CXCL12-201ENST00000343575 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
CXCL12-201ENST00000343575 LIPNQ5VXI9 398 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 FAM214BQ7L5A3 538 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 DOLPP1Q86YN1 238 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 OR11H7Q8NGC8 314 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 OR52N5Q8NH56 324 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 FOXB1Q99853 325 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
CXCL12-201ENST00000343575 ASH2LQ9UBL3 628 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 GDF2Q9UK05 429 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-201ENST00000343575 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 RP1L1Q8IWN7 2480 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-201ENST00000343575 SHANK1Q9Y566 2161 aa12.88□□□□□ -0.35
CXCL12-201ENST00000343575 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 RER1O15258 196 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 OGG1O15527 345 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 PRAF2O60831 178 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 TNFSF13O75888 250 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 GABRA1P14867 456 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 B4GALT1P15291 398 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 OR3A2P47893 321 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 SIRPAP78324 504 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 IDNKQ5T6J7 187 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 DMKNQ6E0U4 476 aaPredicted RBP12.87□□□□□ -0.35
CXCL12-201ENST00000343575 VWA1Q6PCB0 445 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 TMEM65Q6PI78 240 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ZNF679Q8IYX0 411 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 OR10H5Q8NGA6 315 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 FGFBP3Q8TAT2 258 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 RPS4Y2Q8TD47 263 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ASB17Q8WXJ9 295 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 PGLYRP3Q96LB9 341 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 GSX2Q9BZM3 304 aa12.87□□□□□ -0.35
CXCL12-201ENST00000343575 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms