RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SWI5Q1ZZU3 235 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 KCTD21Q4G0X4 260 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 TMPRSS11AQ6ZMR5 421 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 Q6ZSR3 168 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 CATSPERDQ86XM0 798 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ELMOD2Q8IZ81 293 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 OR8B12Q8NGG6 310 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 RPS4Y2Q8TD47 263 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 KLF14Q8TD94 323 aaPredicted RBP12.11□□□□□ -0.47
VPS25-201ENST00000253794 SGCDQ92629 289 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 REPIN1Q9BWE0 567 aaKnown RBP12.11□□□□□ -0.47
VPS25-201ENST00000253794 OR2J1Q9GZK6 312 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 PBOV1Q9GZY1 135 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 OR10A2Q9H208 303 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 POFUT1Q9H488 388 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ISG20L2Q9H9L3 353 aaKnown RBP12.11□□□□□ -0.47
VPS25-201ENST00000253794 FAIMQ9NVQ4 179 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 ERVK-18Q9QC07 812 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 CLEC2DQ9UHP7 191 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
VPS25-201ENST00000253794 LSM2Q9Y333 95 aaKnown RBP12.11□□□□□ -0.47
VPS25-201ENST00000253794 LRBAP50851 2863 aa12.11□□□□□ -0.47
VPS25-201ENST00000253794 C5orf63A6NC05 138 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 B9A039 149 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 LOC110117498-PIK3R3F6TDL0 507 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 J3QLW9 94 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 MT-ND2P03891 347 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 OR4A8P0C604 315 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 ZNF19P17023 458 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 CFL1P23528 166 aaKnown RBP12.1□□□□□ -0.47
VPS25-201ENST00000253794 SERPINF1P36955 418 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 FABP6P51161 128 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 BDH1Q02338 343 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 ACSM1Q08AH1 577 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 MALLQ13021 153 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
VPS25-201ENST00000253794 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 FAM57BQ71RH2 274 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 KRT74Q7RTS7 529 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 FBXL14Q8N1E6 418 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 MUC15Q8N387 334 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 OR2G2Q8NGZ5 317 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 SYNPRQ8TBG9 265 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 SGK3Q96BR1 496 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 HAVCR1Q96D42 359 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 PGAM5Q96HS1 289 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 TRAF4Q9BUZ4 470 aaPredicted RBP12.1□□□□□ -0.47
VPS25-201ENST00000253794 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
VPS25-201ENST00000253794 OR51B6Q9H340 312 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 PLK3Q9H4B4 646 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 BABAM2Q9NXR7 383 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 CGGBP1Q9UFW8 167 aaPredicted RBP12.1□□□□□ -0.47
VPS25-201ENST00000253794 OR52A1Q9UKL2 312 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 ERGIC3Q9Y282 383 aa12.1□□□□□ -0.47
VPS25-201ENST00000253794 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 A0A1B0GWJ7 208 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 LOC390937A0A1W2PQ73 354 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 MYL12BO14950 172 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 CD8AP01732 235 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 TTRP02766 147 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 CCL1P22362 96 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 GCH1P30793 250 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 MPV17P39210 176 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 CHN2P52757 468 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 WNT4P56705 351 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
VPS25-201ENST00000253794 NANOS3P60323 173 aaKnown RBP12.09□□□□□ -0.47
VPS25-201ENST00000253794 ZNF92Q03936 586 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 PSG7Q13046 419 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 OR8B8Q15620 311 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 TBCEQ15813 527 aaPredicted RBP12.09□□□□□ -0.47
VPS25-201ENST00000253794 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 BCL2L15Q5TBC7 163 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 OR2G6Q5TZ20 316 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 AGAP6Q5VW22 663 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 PAMR1Q6UXH9 720 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 PRSS35Q8N3Z0 413 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 PLPP7Q8NBV4 271 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 SPRYD4Q8WW59 207 aaPredicted RBP12.09□□□□□ -0.47
VPS25-201ENST00000253794 MND1Q9BWT6 205 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
VPS25-201ENST00000253794 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 OR4C45A6NMZ5 311 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 OGG1O15527 345 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 RPP14O95059 124 aaKnown RBP12.08□□□□□ -0.48
VPS25-201ENST00000253794 ATE1O95260 518 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 TNFAIP8O95379 198 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 ISG15P05161 165 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 SOD3P08294 240 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 RPSAP08865 295 aaKnown RBP12.08□□□□□ -0.48
VPS25-201ENST00000253794 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 SELEP16581 610 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 KIR3DL2P43630 455 aa12.08□□□□□ -0.48
VPS25-201ENST00000253794 GBX2P52951 348 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms