RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 GLB1L2Q8IW92 636 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 OFCC1Q8IZS5 231 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 LNX2Q8N448 690 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 PNKDQ8N490 385 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 PCYOX1LQ8NBM8 494 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 OR2AE1Q8NHA4 323 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 FNDC8Q8TC99 324 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 SLCO4A1Q96BD0 722 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 SEH1LQ96EE3 360 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 ATP6V1G3Q96LB4 118 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 TMEM120AQ9BXJ8 343 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 POLR2J2Q9GZM3 115 aaKnown RBP7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 POLR2J3Q9H1A7 115 aaKnown RBP7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 SRA1Q9HD15 236 aaKnown RBP7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 TMEM100Q9NV29 134 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 INTS9Q9NV88 658 aaKnown RBP7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 IER3IP1Q9Y5U9 82 aa7.15□□□□□ -1.26
SHKBP1-220ENST00000599716 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.27
SHKBP1-220ENST00000599716 DNAH3Q8TD57 4116 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 IGHV1-69DA0A0B4J2H0 117 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ELOVL7A1L3X0 281 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 LRRC30A6NM36 301 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 FAM220BPB1ANY3 271 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNF879B4DU55 563 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 G3V4G9 280 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 PHYHO14832 338 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 TNFRSF13BO14836 293 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ADAM20O43506 726 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ENSAO43768 121 aaKnown RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 OR10H3O60404 316 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 EDF1O60869 148 aaKnown RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 KHDRBS3O75525 346 aaKnown RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 DIRAS1O95057 198 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 PPP1R3DO95685 299 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 IGHV1-69P01742 117 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 TFF1P04155 84 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 IFNW1P05000 195 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 PSKH1P11801 424 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 IRF2P14316 349 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 NCK1P16333 377 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 PAX6P26367 422 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 PSMB10P40306 273 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 RAD23AP54725 363 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 SELENOWP63302 87 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 KLF10Q13118 480 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 DOC2BQ14184 412 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 TAF9Q16594 264 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNF362Q5T0B9 420 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 LYPD4Q6UWN0 246 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNF620Q6ZNG0 422 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 DCDC5Q6ZRR9 648 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 Q6ZSV7 163 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 OR2T12Q8NG77 320 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 OR8J3Q8NGG0 315 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 SLC7A13Q8TCU3 470 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ACOT11Q8WXI4 607 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 GATAD2BQ8WXI9 593 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 APOBEC3DQ96AK3 386 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 HSH2DQ96JZ2 352 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 WDFY2Q96P53 400 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 PPP1R3EQ9H7J1 279 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 NMNAT1Q9HAN9 279 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 NOX4Q9NPH5 578 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 ACOXLQ9NUZ1 547 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 CMTM6Q9NX76 183 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 VSX1Q9NZR4 365 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 SIGLEC9Q9Y336 463 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 N6AMT1Q9Y5N5 214 aa7.14□□□□□ -1.27
SHKBP1-220ENST00000599716 IGLV1-36A0A0B4J1U3 117 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 TRBV4-1A0A0J9YWV2 114 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SLC22A31A6NKX4 558 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 TIMM23O14925 209 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 PTP4A3O75365 173 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 NDUFB2O95178 105 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SERPINA1P01009 418 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 IFNA14P01570 189 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 LCATP04180 440 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 GRPP07492 148 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 VIMP08670 466 aaKnown RBP7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 ACSM4P0C7M7 580 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SDHAP31040 664 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 LSM6P62312 80 aaKnown RBP7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 HIST1H3AP68431 136 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 EGR3Q06889 387 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 KLRD1Q13241 179 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SEC23BQ15437 767 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 OR8G1Q15617 311 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 OR8B8Q15620 311 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNF181Q2M3W8 571 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SNAI3Q3KNW1 292 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 FGD3Q5JSP0 725 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 HIST2H3PS2Q5TEC6 136 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SLC18B1Q6NT16 456 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 CGB2Q6NT52 195 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 ERICH5Q6P6B1 374 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 TMPRSS11FQ6ZWK6 438 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 HIST2H3AQ71DI3 136 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms