RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GABRA1P14867 456 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 ZNF20P17024 532 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CDK2P24941 298 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CDAP32320 146 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 GNALP38405 381 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 GDNFP39905 211 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 PTH2RP49190 550 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CX3CR1P49238 355 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 POU3F4P49335 361 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CLDN15P56746 228 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CLDN12P56749 244 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 ZNF121P58317 390 aaPredicted RBP9.17□□□□□ -0.94
VPS25-203ENST00000589520 TAS2R20P59543 309 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 PLGLB1Q02325 96 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 KLF9Q13886 244 aaPredicted RBP9.17□□□□□ -0.94
VPS25-203ENST00000589520 SLC10A1Q14973 349 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CCDC92Q53HC0 331 aaPredicted RBP9.17□□□□□ -0.94
VPS25-203ENST00000589520 ZNF529Q6P280 563 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 ZNF813Q6ZN06 617 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CFAP77Q6ZQR2 320 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 Q6ZSR3 168 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 ADGRE4PQ86SQ3 457 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 PLPP7Q8NBV4 271 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 MDS2Q8NDY4 140 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 DEFB124Q8NES8 71 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 OR51D1Q8NGF3 324 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 OR52H1Q8NGJ2 320 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 NABP1Q96AH0 204 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 FGGYQ96C11 551 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 TRAF4Q9BUZ4 470 aaPredicted RBP9.17□□□□□ -0.94
VPS25-203ENST00000589520 TTTY12Q9BZ98 90 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 METTL17Q9H7H0 456 aaPredicted RBP9.17□□□□□ -0.94
VPS25-203ENST00000589520 PARD6AQ9NPB6 346 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 GHRLQ9UBU3 117 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 RAB22AQ9UL26 194 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 CLEC4AQ9UMR7 237 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 SLC5A6Q9Y289 635 aa9.17□□□□□ -0.94
VPS25-203ENST00000589520 MRPS18BQ9Y676 258 aaKnown RBP9.17□□□□□ -0.94
VPS25-203ENST00000589520 IGHV3-15A0A0B4J1V0 119 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 A0A1B0GTI1 187 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 A0A1B0GVC2 190 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 PINLYPA6NC86 204 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 GGT3PA6NGU5 568 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 A6NIN4 97 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 DHRS7CA6NNS2 312 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 TFECO14948 347 aaPredicted RBP9.16□□□□□ -0.94
VPS25-203ENST00000589520 LDLRAD4O15165 306 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 RER1O15258 196 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 LANCL1O43813 399 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 PRAF2O60831 178 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 CTAG2O75638 210 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 BPNT1O95861 308 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 WNT11O96014 354 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 IGLV3-1P01715 115 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 TCRBP04435 133 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 CSF1P09603 554 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 CD3GP09693 182 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 UBBP0CG47 229 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 ZNF708P17019 499 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 OTX1P32242 354 aaPredicted RBP9.16□□□□□ -0.94
VPS25-203ENST00000589520 SELENOPP49908 381 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 LHX2P50458 406 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 PRKXP51817 358 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 DGCR2P98153 550 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 ENDOGQ14249 297 aaKnown RBP9.16□□□□□ -0.94
VPS25-203ENST00000589520 RAB35Q15286 201 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
VPS25-203ENST00000589520 TATDN3Q17R31 274 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 GLYATL3Q5SZD4 288 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 OTPQ5XKR4 325 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 OLFML2AQ68BL7 652 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 DRAM2Q6UX65 266 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 BTN2A1Q7KYR7 527 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 LYPD6Q86Y78 171 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 SIAH3Q8IW03 269 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 UBE2J2Q8N2K1 259 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 ZFP62Q8NB50 900 aaPredicted RBP9.16□□□□□ -0.94
VPS25-203ENST00000589520 DNAAF1Q8NEP3 725 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 OR56B4Q8NH76 319 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 SLC7A6Q92536 515 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 SCMH1Q96GD3 660 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 PGAM5Q96HS1 289 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 SIGLEC12Q96PQ1 595 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 SMAD5Q99717 465 aaKnown RBP9.16□□□□□ -0.94
VPS25-203ENST00000589520 CACNG6Q9BXT2 260 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 OR10A2Q9H208 303 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 GP6Q9HCN6 339 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 TMEM38BQ9NVV0 291 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 ATPIF1Q9UII2 106 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 KIF26BQ2KJY2 2108 aa9.16□□□□□ -0.94
VPS25-203ENST00000589520 TMEM272A0A1B0GTI8 110 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 ANKRD20A5PA0PJZ0 165 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 CYSRT1A8MQ03 144 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 RPL36A-HNRNPH2H7BZ11 118 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 H7C417 338 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 MRPL33O75394 65 aaKnown RBP9.15□□□□□ -0.94
VPS25-203ENST00000589520 CHRM2P08172 466 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 CEACAM1P13688 526 aa9.15□□□□□ -0.94
VPS25-203ENST00000589520 ZNF24P17028 368 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms