RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
IFT20-206ENST00000578122 BARX1Q9HBU1 254 aaPredicted RBP13.18□□□□□ -0.3
IFT20-206ENST00000578122 PTTG3PQ9NZH4 202 aa13.18□□□□□ -0.3
IFT20-206ENST00000578122 AASSQ9UDR5 926 aa13.18□□□□□ -0.3
IFT20-206ENST00000578122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.18□□□□□ -0.3
IFT20-206ENST00000578122 COPS3Q9UNS2 423 aa13.18□□□□□ -0.3
IFT20-206ENST00000578122 ZNF670-ZNF695F2Z2N8 137 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 APOC1P02654 83 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 ATP6V1E1P36543 226 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 EFNA4P52798 201 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 ADARB1P78563 741 aaKnown RBP13.17□□□□□ -0.3
IFT20-206ENST00000578122 PSG7Q13046 419 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 ALKBH6Q3KRA9 238 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 Q5PR19 223 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
IFT20-206ENST00000578122 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 LRRN1Q6UXK5 716 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 KRTAP1-3Q8IUG1 177 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 ZCCHC24Q8N2G6 241 aaKnown RBP13.17□□□□□ -0.3
IFT20-206ENST00000578122 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 NRG4Q8WWG1 115 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 Q96MT0 163 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 SORCS2Q96PQ0 1159 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 MS4A5Q9H3V2 200 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 N6AMT1Q9Y5N5 214 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 TACC2O95359 2948 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 LRBAP50851 2863 aa13.17□□□□□ -0.3
IFT20-206ENST00000578122 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 PHYHO14832 338 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 TIMM8AO60220 97 aaPredicted RBP13.16□□□□□ -0.3
IFT20-206ENST00000578122 APOL3O95236 402 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 ANXA2P07355 339 aaKnown RBP13.16□□□□□ -0.3
IFT20-206ENST00000578122 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
IFT20-206ENST00000578122 SLC2A1P11166 492 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 NAT2P11245 290 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 RAC2P15153 192 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 CAPGP40121 348 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 MTNR1AP48039 350 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 CX3CR1P49238 355 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 IL5RAQ01344 420 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 MALLQ13021 153 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 RIPK1Q13546 671 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
IFT20-206ENST00000578122 TMEM255AQ5JRV8 349 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 ZNF691Q5VV52 312 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 FBXW12Q6X9E4 464 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 KRT77Q7Z794 578 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 HAVCR1Q96D42 359 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 RNFT2Q96EX2 444 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 ADI1Q9BV57 179 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 NIPAL2Q9H841 368 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 SP140LQ9H930 580 aa13.16□□□□□ -0.3
IFT20-206ENST00000578122 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
IFT20-206ENST00000578122 C5orf63A6NC05 138 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 PRR32B1ATL7 298 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 PSMD9O00233 223 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 ATP6V1G2O95670 118 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 CLIC3O95833 236 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 MT-ND5P03915 603 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 OR2T7P0C7T2 308 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 KITLGP21583 273 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 SMCPP49901 116 aaPredicted RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 ZNF121P58317 390 aaPredicted RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 ROM1Q03395 351 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 SNAI3Q3KNW1 292 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 DEGS2Q6QHC5 323 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 ZNF322Q6U7Q0 402 aaPredicted RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 SETD9Q8NE22 299 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 OR10H4Q8NGA5 316 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 OR2T27Q8NH04 317 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 NEU4Q8WWR8 484 aaPredicted RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 OR8B4Q96RC9 309 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 TBX5Q99593 518 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 TTTY10Q9BZA0 68 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 TPK1Q9H3S4 243 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 IKZF2Q9UKS7 526 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 RRP15Q9Y3B9 282 aaKnown RBP13.15□□□□□ -0.3
IFT20-206ENST00000578122 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
IFT20-206ENST00000578122 A0A1W2PQL4 384 aaPredicted RBP13.14□□□□□ -0.31
IFT20-206ENST00000578122 PLSCR5A0PG75 271 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 C17orf100A8MU93 164 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 H0YAE9 185 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 SSX4O60224 188 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 ZNF254O75437 659 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 LIPAP38571 399 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 ZNF81P51508 661 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 CXCR4P61073 352 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 ZNF91Q05481 1191 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 EGR3Q06889 387 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 IL18R1Q13478 541 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 GLYATL3Q5SZD4 288 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 OR2T2Q6IF00 324 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 SPNS3Q6ZMD2 512 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 FAM57BQ71RH2 274 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 PRSS45Q7RTY3 260 aa13.14□□□□□ -0.31
IFT20-206ENST00000578122 MRPL21Q7Z2W9 205 aaKnown RBP13.14□□□□□ -0.31
IFT20-206ENST00000578122 ZNF679Q8IYX0 411 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms