RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CMTM3Q96MX0 182 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZFP3Q96NJ6 502 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 HDHD2Q9H0R4 259 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 CRLF2Q9HC73 371 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF224Q9NZL3 707 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 RCE1Q9Y256 329 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ARPC4-TTLL3A0A0A6YYG9 625 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 EEF1E1O43324 174 aaKnown RBP8.29□□□□□ -1.08
LINC00838-201ENST00000562956 UBL3O95164 117 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 CALCBP10092 127 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 CD46P15529 392 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF708P17019 499 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 CCL11P51671 97 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF121P58317 390 aaPredicted RBP8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZMYND11Q15326 602 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ESCO2Q56NI9 601 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 PDSS1Q5T2R2 415 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 SLC51BQ86UW2 128 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 OR51A2Q8NGJ7 313 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZFAND1Q8TCF1 268 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 HAS2Q92819 552 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ALKBH3Q96Q83 286 aaPredicted RBP8.29□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF319Q9P2F9 582 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 FOXJ3Q9UPW0 622 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 SLC5A6Q9Y289 635 aa8.29□□□□□ -1.08
LINC00838-201ENST00000562956 NUPL2O15504 423 aaKnown RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 TMEM127O75204 238 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 FSTP19883 344 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 CX3CR1P49238 355 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 TATDN3Q17R31 274 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 HYAL4Q2M3T9 481 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 RNASE12Q5GAN4 147 aaKnown RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF766Q5HY98 468 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 PRSS45Q7RTY3 260 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 ZFP62Q8NB50 900 aaPredicted RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 FDCSPQ8NFU4 85 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 SYNPRQ8TBG9 265 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 OR51E1Q8TCB6 317 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 RFT1Q96AA3 541 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 FBXO17Q96EF6 278 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 SCMH1Q96GD3 660 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 GON7Q9BXV9 100 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 CKLFQ9UBR5 152 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 CAMK2AQ9UQM7 478 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 LIPGQ9Y5X9 500 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 A0A1B0GTI1 187 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 KIR2DL3P43628 341 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 INPP1P49441 399 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 SRP9P49458 86 aaKnown RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF84P51523 738 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 DGCR2P98153 550 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 SPOCK1Q08629 439 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 RNFT1Q5M7Z0 435 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF57Q68EA5 555 aaPredicted RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 MTFR2Q6P444 385 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 LUZP2Q86TE4 346 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 NAA40Q86UY6 237 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 GJC3Q8NFK1 279 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 OR8B12Q8NGG6 310 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 FGGYQ96C11 551 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 SOX7Q9BT81 388 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 MRI1Q9BV20 369 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 ABCG5Q9H222 651 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 KCNK15Q9H427 330 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 NIPAL2Q9H841 368 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 RNF121Q9H920 327 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 ZNF275Q9NSD4 429 aaPredicted RBP8.28□□□□□ -1.08
LINC00838-201ENST00000562956 MCUBQ9NWR8 336 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 MUC6Q6W4X9 2439 aa8.28□□□□□ -1.08
LINC00838-201ENST00000562956 C5orf63A6NC05 138 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 E9PLN8 166 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 LYRM1O43325 122 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 SYT7O43581 403 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 PDGFAP04085 211 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 CD3GP09693 182 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 TMIGD3P0DMS9 266 aaPredicted RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 CFPP27918 469 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 MAP2K3P46734 347 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 MMP15P51511 669 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 GRB2P62993 217 aaKnown RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 HIST1H3AP68431 136 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 C3AR1Q16581 482 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 HIST2H3PS2Q5TEC6 136 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 FAM166AQ6J272 317 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 HIST2H3AQ71DI3 136 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 GALNT11Q8NCW6 608 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 OR51D1Q8NGF3 324 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 GCDHQ92947 438 aaPredicted RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 PHF21AQ96BD5 680 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 ADAT3Q96EY9 351 aaPredicted RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 NLKQ9UBE8 527 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 ALG5Q9Y673 324 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 TPPPO94811 219 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 B4GALT1P15291 398 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 ERP29P30040 261 aaKnown RBP8.27□□□□□ -1.09
LINC00838-201ENST00000562956 GZMKP49863 264 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 TNFSF10P50591 281 aa8.27□□□□□ -1.09
LINC00838-201ENST00000562956 EFNB2P52799 333 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms