RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CHMP1AQ9HD42 196 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 IER3IP1Q9Y5U9 82 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 IGHV1OR21-1A0A087WYE8 117 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 LOC100289279A0A1B0GTE1 492 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 TMEM72A0PK05 275 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 TMEM150CB9EJG8 249 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 CCSO14618 274 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 IL33O95760 270 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 FCGR3AP08637 254 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF735P0CB33 412 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 S100A2P29034 98 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 HSD11B2P80365 405 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 ALKBH1Q13686 389 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 NR0B2Q15466 257 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 SSX2Q16385 188 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 YOD1Q5VVQ6 348 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 GATSQ8NAP1 163 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 OR4K13Q8NH42 304 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 OIT3Q8WWZ8 545 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 DVL3Q92997 716 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 TSLPQ969D9 159 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 CCDC74AQ96AQ1 378 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 KIRREL1Q96J84 757 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 SLC46A1Q96NT5 459 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 NECAB3Q96P71 396 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 ATG5Q9H1Y0 275 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 PARP11Q9NR21 331 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
RABGGTA-220ENST00000560998 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 A0A0A6YYH2 397 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 A0A1B0GV90 55 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 A0A1B0GWJ7 208 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CPED1A4D0V7 1026 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 A6NJ64 397 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 A6NLC8 198 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 TERTO14746 1132 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CYB5AP00167 134 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 HKR1P10072 659 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 BCKDHBP21953 392 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 TACR3P29371 465 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CFHR1Q03591 330 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 RHEBQ15382 184 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 OR7A5Q15622 319 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CD226Q15762 336 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 NSUN5P2Q63ZY6 315 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 DHRS11Q6UWP2 260 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 DPY19L2P2Q6ZN68 376 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CARFQ8N187 725 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 COMMD1Q8N668 190 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 MVB12AQ96EY5 273 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 NXF5Q9H1B4 397 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 FBXO4Q9UKT5 387 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 A0A0B4J2A0 478 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 ZNF736B4DX44 427 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 UTS2O95399 124 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 DDAH2O95865 285 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 DCNP07585 359 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 LYL1P12980 280 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 POU3F4P49335 361 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 ARL4DP49703 201 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 PLA2G7Q13093 441 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 SKP2Q13309 424 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 RAB11BQ15907 218 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 WBP2NLQ6ICG8 309 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 BTNL8Q6UX41 500 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 HIST2H3AQ71DI3 136 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 BPIFB2Q8N4F0 458 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 OR10H5Q8NGA6 315 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 OR56B1Q8NGI3 324 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 OR1L3Q8NH93 324 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 SEH1LQ96EE3 360 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CCNL2Q96S94 520 aaPredicted RBP12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 OR8D2Q9GZM6 311 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 CHST5Q9GZS9 411 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 PARPBPQ9NWS1 579 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 SHPKQ9UHJ6 478 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 ADAM18Q9Y3Q7 739 aa12.49□□□□□ -0.41
RABGGTA-220ENST00000560998 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 FRG2CA6NGY1 282 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 HSPB2A8KAH6 182 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 TAAR5O14804 337 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 IGKV3-11P04433 115 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 HPGDP15428 266 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 RPL4P36578 427 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 RPS4XP62701 263 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 RAB1AP62820 205 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 HSPB2Q16082 182 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
RABGGTA-220ENST00000560998 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms