RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 GCSHP23434 173 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 TNFSF8P32971 234 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 OGFOD3Q6PK18 319 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 CDCA4Q9BXL8 241 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 SLC26A1Q9H2B4 701 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 PIGMQ9H3S5 423 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 CGGBP1Q9UFW8 167 aaPredicted RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 PCOLCE2Q9UKZ9 415 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 R4GN57 208 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 TNFSF11O14788 317 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 GIFP27352 417 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 HTR2BP41595 481 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 NPY4RP50391 375 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 RAC3P60763 192 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 UBE2MP61081 183 aaKnown RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 RPS25P62851 125 aaKnown RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 USF2Q15853 346 aaPredicted RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 IAH1Q2TAA2 248 aaPredicted RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 OSR2Q8N2R0 312 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 HPSE2Q8WWQ2 592 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 PBOV1Q9GZY1 135 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 GPR173Q9NS66 373 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 E5RGE8 158 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 J3KTA2 159 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 APOC3P02656 99 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 ZNF17P17021 662 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 GABRA4P48169 554 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 TCTE3Q8IZS6 198 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 OR10P1Q8NGE3 313 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 FRZBQ92765 325 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 COX14Q96I36 57 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 ZNF75AQ96N20 296 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 VN1R1Q9GZP7 353 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 CXXC4Q9H2H0 198 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 CD300AQ9UGN4 299 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 HPNP05981 417 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 GCAP28676 217 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 AVPR2P30518 371 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 AGFG1P52594 562 aaKnown RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 SLC9A3R2Q15599 337 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 ARHGDIGQ99819 225 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 TNRC6CQ9HCJ0 1690 aaKnown RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 EMC7Q9NPA0 242 aa10.81□□□□□ -0.68
NEK9-210ENST00000557026 MYEF2Q9P2K5 600 aaKnown RBP10.81□□□□□ -0.68
NEK9-210ENST00000557026 PTAFRP25105 342 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 RAB1AP62820 205 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 COX20Q5RI15 118 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 C17orf107Q6ZR85 190 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TMEM230Q96A57 120 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 RNF32Q9H0A6 362 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 GDF2Q9UK05 429 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 TIMM8BQ9Y5J9 83 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TOXO94900 526 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 IFI6P09912 130 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TGM1P22735 817 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 BTG2P78543 158 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 CDONQ4KMG0 1287 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 OR1L3Q8NH93 324 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 CT55Q8WUE5 264 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 FBXO17Q96EF6 278 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 UQCC2Q9BRT2 126 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 SIRT5Q9NXA8 310 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TCFL5Q9UL49 500 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TRAF3IP2O43734 574 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 LRP3O75074 770 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 F10P00742 488 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 MT-ND4LP03901 98 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 NPBWR1P48145 328 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TMEM267Q0VDI3 215 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 AGERQ15109 404 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 SLC51BQ86UW2 128 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 MUC20Q8N307 709 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 SPICQ8N5J4 248 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 LILRA3Q8N6C8 439 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 OR8B3Q8NGG8 313 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 GPR78Q96P69 363 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 OR8B2Q96RD0 313 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 RNF2Q99496 336 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 BARX1Q9HBU1 254 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 GPR84Q9NQS5 396 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 B9D1Q9UPM9 204 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 SMLR1H3BR10 107 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 WDR1O75083 606 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 LIPCP11150 499 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 COX6B1P14854 86 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 RAB5CP51148 216 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 TCTN1Q2MV58 587 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 SVBPQ8N300 66 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 C17orf47Q8NEP4 570 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 OR2T6Q8NHC8 308 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 RPEQ96AT9 228 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 SUCNR1Q9BXA5 334 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 FAM234AQ9H0X4 552 aa10.8□□□□□ -0.68
NEK9-210ENST00000557026 FGF20Q9NP95 211 aaPredicted RBP10.8□□□□□ -0.68
NEK9-210ENST00000557026 OSGIN1Q9UJX0 560 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms