RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 WDR25Q64LD2 544 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SFRP4Q6FHJ7 346 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 GLYATQ6IB77 296 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SMARCD3Q6STE5 483 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 C9orf139Q6ZV77 190 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 ARPINQ7Z6K5 226 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 ADCK1Q86TW2 530 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 CYP4Z1Q86W10 505 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 OR5L1Q8NGL2 311 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SLC25A28Q96A46 364 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SLCO4A1Q96BD0 722 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 TMIGD2Q96BF3 282 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 MAP6Q96JE9 813 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 COG8Q96MW5 612 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 HOPXQ9BPY8 73 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 HDHD2Q9H0R4 259 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 OR52D1Q9H346 318 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 MARCH7Q9H992 704 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 EFCAB1Q9HAE3 211 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 RPRD1BQ9NQG5 326 aaKnown RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 DCAF13Q9NV06 445 aaKnown RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 TMEM100Q9NV29 134 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 ABCD2Q9UBJ2 740 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 MIOXQ9UGB7 285 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 AURKCQ9UQB9 309 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 AP3M1Q9Y2T2 418 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 FAM181BA6NEQ2 426 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 SEMG1P04279 462 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 PYCR1P32322 319 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 RGS6P49758 472 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 RPS6KA3P51812 740 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 RAD23AP54725 363 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 KRTAP10-3P60369 221 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 IL13RA1P78552 427 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 DEFA6Q01524 100 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 POU4F2Q12837 409 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF181Q2M3W8 571 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 RFX4Q33E94 735 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 SNAI3Q3KNW1 292 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 SLC35F1Q5T1Q4 408 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 C16orf87Q6PH81 154 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 LRRN1Q6UXK5 716 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 HACD2Q6Y1H2 254 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 SPATC1Q76KD6 591 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 KIR3DL3Q8N743 410 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 SDR9C7Q8NEX9 313 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 OR8B3Q8NGG8 313 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 OR2AE1Q8NHA4 323 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 OR8B2Q96RD0 313 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 PITX2Q99697 317 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 CCDC134Q9H6E4 229 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 SMURF1Q9HCE7 757 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 MRGBPQ9NV56 204 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 ADA2Q9NZK5 511 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 PDP1Q9P0J1 537 aaPredicted RBP9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 CYB5R1Q9UHQ9 305 aa9.6□□□□□ -0.87
PRPF40B-212ENST00000551111 J3QW42 95 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 IFNL4K9M1U5 179 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 TNFRSF13BO14836 293 aaPredicted RBP9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 LCATP04180 440 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 PPIAL4GP0DN37 164 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 CA6P23280 308 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 CRABP1P29762 137 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 PSMB10P40306 273 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 CD200P41217 278 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 GATA4P43694 442 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 MTNR1AP48039 350 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF92Q03936 586 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 TRAP1Q12931 704 aaKnown RBP9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 BTNL3Q6UXE8 466 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF826PQ6ZT77 177 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 ZBTB46Q86UZ6 589 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 BOLLQ8N9W6 283 aaKnown RBP9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 CYB561A3Q8NBI2 242 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 OR51L1Q8NGJ5 315 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 FANK1Q8TC84 345 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 Q8TCH9 128 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 PLEKHA8Q96JA3 519 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 DDOQ99489 341 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 HCAR1Q9BXC0 346 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 PRDM13Q9H4Q3 707 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 ARGLU1Q9NWB6 273 aaPredicted RBP9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 CLN8Q9UBY8 286 aa9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 FAM32AQ9Y421 112 aaKnown RBP9.59□□□□□ -0.87
PRPF40B-212ENST00000551111 CENPVL3A0A0U1RRI6 287 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 A0A1B0GW55 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 TVP23AA6NH52 213 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 POM121CA8CG34 1229 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 ARPC3O15145 178 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L2P0CJ85 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L3P0CJ86 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L4P0CJ87 422 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L5P0CJ88 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L6P0CJ89 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 DUX4L7P0CJ90 424 aa9.58□□□□□ -0.88
PRPF40B-212ENST00000551111 MMP9P14780 707 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms