RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PRPS1P60891 318 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 CSNK2A1P68400 391 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 TGFBR3Q03167 851 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 HSF2Q03933 536 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 MXD1Q05195 221 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 LGALS3BPQ08380 585 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 ST3GAL3Q11203 375 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 GRK1Q15835 563 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 GABRA6Q16445 453 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SPDYE7PQ495Y7 208 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SYT14P1Q58G82 188 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 ZMAT1Q5H9K5 638 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 RPL13AP3Q6NVV1 102 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 CNIH2Q6PI25 160 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SHISA2Q6UWI4 295 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 TMEM107Q6UX40 140 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 B3GLCTQ6Y288 498 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 TMPPEQ6ZT21 453 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 RFPL4BQ6ZWI9 263 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 PEG10Q86TG7 708 aaKnown RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SLC51BQ86UW2 128 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 GID4Q8IVV7 300 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 CADM2Q8N3J6 435 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 C17orf78Q8N4C9 275 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 MS4A15Q8N5U1 240 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 OR8H1Q8NGG4 311 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 OR5H6Q8NGV6 325 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 PHOSPHO1Q8TCT1 267 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 GPR119Q8TDV5 335 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 ZNF431Q8TF32 576 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SLC38A5Q8WUX1 472 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 PHYHIPQ92561 330 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 HOXB13Q92826 284 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 PMM1Q92871 262 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 RFT1Q96AA3 541 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 APH1AQ96BI3 265 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 RNFT2Q96EX2 444 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 MRPL48Q96GC5 212 aaKnown RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 TMEM19Q96HH6 336 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 LRR1Q96L50 414 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 PRRC1Q96M27 445 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 AMDHD1Q96NU7 426 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SORCS2Q96PQ0 1159 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 ATF6BQ99941 703 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 THAP7Q9BT49 309 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 MRI1Q9BV20 369 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 ZNF747Q9BV97 191 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 C1QTNF6Q9BXI9 259 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 BPESC1Q9GZL8 116 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 FN3KQ9H479 309 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 GLIPR2Q9H4G4 154 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 METTL17Q9H7H0 456 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 CACYBPQ9HB71 228 aaKnown RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SERINC1Q9NRX5 453 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 CYSLTR2Q9NS75 346 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 MCUBQ9NWR8 336 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 PARPBPQ9NWS1 579 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 DNAJC27Q9NZQ0 273 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 NLKQ9UBE8 527 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 CLEC2DQ9UHP7 191 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 ING1Q9UK53 422 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SLC13A4Q9UKG4 626 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 A4GNTQ9UNA3 340 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 AMDHD2Q9Y303 409 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 NOSIPQ9Y314 301 aaKnown RBP5.18□□□□□ -1.58
CPSF7-219ENST00000539952 SPEF1Q9Y4P9 236 aa5.18□□□□□ -1.58
CPSF7-219ENST00000539952 IGKV3D-15A0A087WSY6 115 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 LINC00854A0A1B0GVQ3 168 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 A0A1B0GW55 424 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 A0A1W2PR80 420 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 C7orf66A4D0T2 115 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 LRP5LA4QPB2 252 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUXAA6NLW8 204 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 SULT2B1O00204 365 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 FFAR1O14842 300 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 EIF4E2O60573 245 aaKnown RBP5.17□□□□□ -1.58
CPSF7-219ENST00000539952 ECDO95905 644 aaPredicted RBP5.17□□□□□ -1.58
CPSF7-219ENST00000539952 IGHA1P01876 353 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 CD1AP06126 327 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 BCHEP06276 602 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUX4L2P0CJ85 424 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUX4L3P0CJ86 424 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUX4L4P0CJ87 422 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUX4L5P0CJ88 424 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUX4L6P0CJ89 424 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 DUX4L7P0CJ90 424 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 NR2F1P10589 423 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 TNFRSF1BP20333 461 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 NPR2P20594 1047 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 PAICSP22234 425 aaKnown RBP5.17□□□□□ -1.58
CPSF7-219ENST00000539952 AZGP1P25311 298 aaKnown RBP5.17□□□□□ -1.58
CPSF7-219ENST00000539952 APEX1P27695 318 aaKnown RBP5.17□□□□□ -1.58
CPSF7-219ENST00000539952 SHC1P29353 583 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 HTR1FP30939 366 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 ATP6V1E1P36543 226 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 SLC1A3P43003 542 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 PITPNBP48739 271 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 PPOXP50336 477 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 HILS1P60008 231 aa5.17□□□□□ -1.58
CPSF7-219ENST00000539952 FOXL1Q12952 345 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms