RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ELAVL1Q15717 326 aaKnown RBP15.73■□□□□ 0.11
RAB40C-205ENST00000539661 ACTBL2Q562R1 376 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 CCL4L1Q8NHW4 92 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF563Q8TA94 476 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 ELSPBP1Q96BH3 223 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 SULT4A1Q9BR01 284 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 FBLN5Q9UBX5 448 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 CACFD1Q9UGQ2 172 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 SLC16A7O60669 478 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 GJA4P35212 333 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 LPAR6P43657 344 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 SLC6A8P48029 635 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 LBX1P52954 281 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 QRFPP83859 136 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 BIKQ13323 160 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 NFATC4Q14934 902 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 SLC22A6Q4U2R8 563 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 TMPPEQ6ZT21 453 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 MED25Q71SY5 747 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 C7orf61Q8IZ16 206 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF615Q8N8J6 731 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 STARD5Q9NSY2 213 aa15.73■□□□□ 0.11
RAB40C-205ENST00000539661 TRAV36DV7A0A075B6V5 113 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 MED6O75586 246 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 INSM1Q01101 510 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-205ENST00000539661 RBM39Q14498 530 aaKnown RBP15.72■□□□□ 0.11
RAB40C-205ENST00000539661 RD3Q7Z3Z2 195 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 ARHGEF39Q8N4T4 335 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 ARRDC1Q8N5I2 433 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 OR4K15Q8NH41 348 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 KIRREL1Q96J84 757 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 WDR92Q96MX6 357 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 SCGB3A2Q96PL1 93 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 TAAR9Q96RI9 348 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 CLCC1Q96S66 551 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 CNTD2Q9H8S5 307 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 G6PC2Q9NQR9 355 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 PRTFDC1Q9NRG1 225 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 OR5AC2Q9NZP5 309 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 OR52A1Q9UKL2 312 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 ANAPC10Q9UM13 185 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 GPR132Q9UNW8 380 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 EMC9Q9Y3B6 208 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 FLVCR1Q9Y5Y0 555 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 POM121BA6NF01 834 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 K7EQS6 105 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 GATCO43716 136 aaKnown RBP15.72■□□□□ 0.11
RAB40C-205ENST00000539661 MT-ATP6P00846 226 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 CA3P07451 260 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 CSNK1EP49674 416 aaKnown RBP15.72■□□□□ 0.11
RAB40C-205ENST00000539661 UNC119Q13432 240 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 SGCBQ16585 318 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 VAX1Q5SQQ9 334 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 ADAMTS18Q8TE60 1221 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 CMBLQ96DG6 245 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 NECAB3Q96P71 396 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-205ENST00000539661 TAF9BQ9HBM6 251 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 OR2S2Q9NQN1 319 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 WDFY4Q6ZS81 3184 aa15.72■□□□□ 0.11
RAB40C-205ENST00000539661 IL33O95760 270 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 PPT1P50897 306 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 ACKR1Q16570 336 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 DHRS11Q6UWP2 260 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 C5orf46Q6UWT4 87 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 SLC29A4Q7RTT9 530 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 C2orf50Q96LR7 162 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 LAT2Q9GZY6 243 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 TXNIPQ9H3M7 391 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 C11orf98E9PRG8 122 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 CLDN4O14493 209 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 SSX5O60225 188 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 LRP3O75074 770 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 PMP2P02689 132 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 CPT2P23786 658 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 ADH6P28332 368 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 HGFACQ04756 655 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 C9orf50Q5SZB4 431 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 KDM8Q8N371 416 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 SLC22A24Q8N4F4 322 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 ZNF775Q96BV0 537 aaPredicted RBP15.71■□□□□ 0.11
RAB40C-205ENST00000539661 ZC3H10Q96K80 434 aaKnown RBP15.71■□□□□ 0.11
RAB40C-205ENST00000539661 FOXN4Q96NZ1 517 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 OBP2AQ9NY56 170 aa15.71■□□□□ 0.11
RAB40C-205ENST00000539661 KIF26BQ2KJY2 2108 aa15.71■□□□□ 0.1
RAB40C-205ENST00000539661 CXCR1P25024 350 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 CRABP1P29762 137 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 CD80P33681 288 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 GLO1Q04760 184 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 RUNX3Q13761 415 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 OTPQ5XKR4 325 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 CLEC18BQ6UXF7 455 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 LYPD6BQ8NI32 183 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 TMEM230Q96A57 120 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 SLC26A1Q9H2B4 701 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 CLDN16Q9Y5I7 305 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 IGHMP01871 453 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 CHRM2P08172 466 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 CTLA4P16410 223 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 STARD6P59095 220 aa15.7■□□□□ 0.1
RAB40C-205ENST00000539661 DEGS2Q6QHC5 323 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms