RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 E7EQL1 145 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 MYL12BO14950 172 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 ZNF254O75437 659 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 PNPP00491 289 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 NR4A1P22736 598 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 THBS4P35443 961 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 MAP2K4P45985 399 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 CHN2P52757 468 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 UCP2P55851 309 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 GABARAPL2P60520 117 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 PPP1CBP62140 327 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 ACTA2P62736 377 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 ACTG2P63267 376 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 DOC2BQ14184 412 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 ODF4Q2M2E3 257 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 ZNF829Q3KNS6 432 aaPredicted RBP11.82□□□□□ -0.52
CD44-224ENST00000526669 DEGS2Q6QHC5 323 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 DRAM2Q6UX65 266 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
CD44-224ENST00000526669 SLC25A40Q8TBP6 338 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 PELI1Q96FA3 418 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 TMEM204Q9BSN7 226 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 NIPAL2Q9H841 368 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 UBTD1Q9HAC8 227 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 FAM206AQ9NX38 181 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 SLC22A13Q9Y226 551 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 CAB39Q9Y376 341 aaPredicted RBP11.82□□□□□ -0.52
CD44-224ENST00000526669 R4GMQ9 66 aa11.82□□□□□ -0.52
CD44-224ENST00000526669 ARID1AO14497 2285 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 TMEM269A0A1B0GVZ9 245 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 E9PI62 339 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 LOC110117498-PIK3R3F6TDL0 507 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 H3BSH0 61 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 SRSF10O75494 262 aaKnown RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 CTAG2O75638 210 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 SULT1C4O75897 302 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 PCSK6P29122 969 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 RGS6P49758 472 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 NKX6-1P78426 367 aaPredicted RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 ZNF672Q499Z4 452 aaPredicted RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 RGS7BPQ6MZT1 257 aaPredicted RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 ARL9Q6T311 187 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 TMPRSS11AQ6ZMR5 421 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 RHOUQ7L0Q8 258 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 KLBQ86Z14 1044 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 ZFP41Q8N8Y5 198 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 OR8B12Q8NGG6 310 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 GATAD2BQ8WXI9 593 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 RORBQ92753 470 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 C1QTNF5Q9BXJ0 243 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 YTHDF1Q9BYJ9 559 aaKnown RBP11.81□□□□□ -0.52
CD44-224ENST00000526669 OR2J1Q9GZK6 312 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 ZNF319Q9P2F9 582 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 SPEF1Q9Y4P9 236 aa11.81□□□□□ -0.52
CD44-224ENST00000526669 PNMA8CA0A1B0GUJ8 204 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 FAM221AA4D161 298 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 CLPTM1O96005 669 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 LALBAP00709 142 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 APOC1P02654 83 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 MT-ND5P03915 603 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 TACSTD2P09758 323 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 MPV17P39210 176 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 RAD52P43351 418 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 KIR3DL2P43630 455 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 GTF2A1P52655 376 aaPredicted RBP11.8□□□□□ -0.52
CD44-224ENST00000526669 IRF3Q14653 427 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 HLXQ14774 488 aaPredicted RBP11.8□□□□□ -0.52
CD44-224ENST00000526669 TIGD6Q17RP2 521 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 WDR38Q5JTN6 314 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 GLYATL3Q5SZD4 288 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 BCL2L15Q5TBC7 163 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 XAF1Q6GPH4 301 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 PRSS45Q7RTY3 260 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 PRSS48Q7RTY5 328 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 CATSPERDQ86XM0 798 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 SYS1Q8N2H4 156 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 NANOGP1Q8N7R0 232 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 NUP37Q8NFH4 326 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 OR52N1Q8NH53 320 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
CD44-224ENST00000526669 OR5M11Q96RB7 305 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 BCL2L14Q9BZR8 327 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 PBOV1Q9GZY1 135 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 CLEC4MQ9H2X3 399 aaPredicted RBP11.8□□□□□ -0.52
CD44-224ENST00000526669 G6PC2Q9NQR9 355 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 CA10Q9NS85 328 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 CISD1Q9NZ45 108 aaKnown RBP11.8□□□□□ -0.52
CD44-224ENST00000526669 OR52A1Q9UKL2 312 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 ERGIC3Q9Y282 383 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 SNX5Q9Y5X3 404 aa11.8□□□□□ -0.52
CD44-224ENST00000526669 TMEM129A0AVI4 362 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 GOSR1O95249 250 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 ATE1O95260 518 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms