RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FMO3P31513 532 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 OTX1P32242 354 aaPredicted RBP14.37□□□□□ -0.11
SQLE-205ENST00000521232 RBMXP38159 391 aaKnown RBP14.37□□□□□ -0.11
SQLE-205ENST00000521232 RPS27P42677 84 aaKnown RBP14.37□□□□□ -0.11
SQLE-205ENST00000521232 MALLQ13021 153 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 DNAL1Q4LDG9 190 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 TMEM155Q4W5P6 130 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 LIPNQ5VXI9 398 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 LYPD4Q6UWN0 246 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 C1orf229Q6ZS94 237 aaPredicted RBP14.37□□□□□ -0.11
SQLE-205ENST00000521232 SLC7A6OSQ96CW6 309 aaPredicted RBP14.37□□□□□ -0.11
SQLE-205ENST00000521232 MEGF10Q96KG7 1140 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 CMC2Q9NRP2 79 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 TMEM100Q9NV29 134 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 UBAP1Q9NZ09 502 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 COMMD3-BMI1R4GMX3 469 aa14.37□□□□□ -0.11
SQLE-205ENST00000521232 ANK2Q01484 3957 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 A0A0G2JMP0 313 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 A0A0X1KG70 313 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 DHRS12A0PJE2 317 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 TMEM178BH3BS89 294 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 J3QLI3 93 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 M0R135 149 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 ZNF593O00488 134 aaPredicted RBP14.36□□□□□ -0.11
SQLE-205ENST00000521232 MLNRO43193 412 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 TCF21O43680 179 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 AVPP01185 164 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 IFNGP01579 166 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 GYPBP06028 91 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 CLUP10909 449 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 GATA3P23771 443 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 SRP9P49458 86 aaKnown RBP14.36□□□□□ -0.11
SQLE-205ENST00000521232 ENTPD1P49961 510 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 BLVRAP53004 296 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 BTG1P62324 171 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 SRSF2Q01130 221 aaKnown RBP14.36□□□□□ -0.11
SQLE-205ENST00000521232 DCXRQ7Z4W1 244 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 TMEM179BQ7Z7N9 219 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 SPICQ8N5J4 248 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 TEX29Q8N6K0 151 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 ZNF511Q8NB15 262 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 OR4M2Q8NGB6 313 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 OR10AD1Q8NGE0 317 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 ST7LQ8TDW4 575 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 SLCO4A1Q96BD0 722 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 ZNF799Q96GE5 643 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 TMPRSS13Q9BYE2 586 aa14.36□□□□□ -0.11
SQLE-205ENST00000521232 METTL17Q9H7H0 456 aaPredicted RBP14.36□□□□□ -0.11
SQLE-205ENST00000521232 RIIAD1A6NNX1 92 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 GNGT2O14610 69 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 GRK5P34947 590 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 MMP16P51512 607 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 ZMYND11Q15326 602 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 LINC01590Q5TEZ4 76 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 DCAF12L2Q5VW00 463 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 DRAM2Q6UX65 266 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 PGAP1Q75T13 922 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 KLHL36Q8N4N3 616 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 BHLHE23Q8NDY6 225 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 TEX47Q8TBZ9 253 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 PATZ1Q9HBE1 687 aaKnown RBP14.35□□□□□ -0.11
SQLE-205ENST00000521232 PCDHB10Q9UN67 800 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 DOCK11Q5JSL3 2073 aa14.35□□□□□ -0.11
SQLE-205ENST00000521232 PPIAL4EA0A075B759 164 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 PPIAL4CA0A0B4J2A2 164 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 PPIAL4DF5H284 164 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 F5H5P2 479 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 H3BN98 237 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 FOXH1O75593 365 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 SPARCP09486 303 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 PPIAL4FP0DN26 164 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 ZNF3P17036 446 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 ZFP36P26651 326 aaKnown RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 SLC6A9P48067 706 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 ZNF181Q2M3W8 571 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 SNAI3Q3KNW1 292 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 SHQ1Q6PI26 577 aaKnown RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 ZNF771Q7L3S4 317 aaPredicted RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 CELF2-AS1Q8N7Q2 184 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 PAPD5Q8NDF8 572 aaKnown RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 ZNF420Q8TAQ5 688 aaPredicted RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 SLAMF6Q96DU3 332 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 KCNJ15Q99712 375 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 REPIN1Q9BWE0 567 aaKnown RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 PDP1Q9P0J1 537 aaPredicted RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 POMPQ9Y244 141 aa14.34□□□□□ -0.11
SQLE-205ENST00000521232 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
SQLE-205ENST00000521232 LOC105371242A0A075B767 164 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 A0A0A6YYJ9 748 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 TCRBV3S1A0A5B6 114 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 F5H0A9 414 aaPredicted RBP14.33□□□□□ -0.12
SQLE-205ENST00000521232 DNAJC8O75937 253 aaPredicted RBP14.33□□□□□ -0.12
SQLE-205ENST00000521232 FSTL3O95633 263 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 HLA-DPB1P04440 258 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 MDH2P40926 338 aaKnown RBP14.33□□□□□ -0.12
SQLE-205ENST00000521232 GATA4P43694 442 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 PRSS12P56730 875 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 LCN2P80188 198 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 SCGB2A2Q13296 93 aa14.33□□□□□ -0.12
SQLE-205ENST00000521232 MAB21L1Q13394 359 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms